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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4471 and GFF4472 are separated by 138 nucleotides
GFF4472 and GFF4473 are separated by 1150 nucleotides
GFF4473 and GFF4474 are separated by 125 nucleotides
GFF4474 and GFF4475 are separated by 11 nucleotides
GFF4471 - Transcriptional regulator, MerR family, at 4,463,948 to 4,464,427
GFF4471
GFF4472 - hypothetical protein, at 4,464,566 to 4,464,925
GFF4472
GFF4473 - hypothetical protein, at 4,466,076 to 4,466,291
GFF4473
GFF4474 - hypothetical protein, at 4,466,417 to 4,466,809
GFF4474
GFF4475 - Copper/silver efflux RND transporter, transmembrane protein CusA, at 4,466,821 to 4,469,961
GFF4475
Group
Condition
GFF4471
GFF4472
GFF4473
GFF4474
GFF4475
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.3
N.D.
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
N.D.
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
N.D.
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
N.D.
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
N.D.
+0.1
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.0
N.D.
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
N.D.
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.3
N.D.
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.2
N.D.
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.4
N.D.
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.1
N.D.
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
-0.3
N.D.
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.4
N.D.
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.3
N.D.
+0.6
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.4
N.D.
+0.7
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.3
N.D.
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
+0.0
N.D.
+0.7
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
+0.2
N.D.
+0.6
+0.4
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