Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF445 and GFF446 overlap by 4 nucleotidesGFF446 and GFF447 overlap by 4 nucleotidesGFF447 and GFF448 overlap by 4 nucleotidesGFF448 and GFF449 overlap by 17 nucleotides GFF445 - Ferrichrome transport ATP-binding protein FhuC, at 483,352 to 484,128 GFF445 GFF446 - Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1), at 484,125 to 485,150 GFF446 GFF447 - Vitamin B12 ABC transporter, substrate-binding protein BtuF, at 485,147 to 486,019 GFF447 GFF448 - Adenosylcobinamide kinase (EC 2.7.1.156) / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62), at 486,016 to 486,621 GFF448 GFF449 - Cobyrinic acid a,c-diamide synthetase (EC 6.3.5.11), at 486,605 to 488,026 GFF449
Group Condition GFF445 GFF446 GFF447 GFF448 GFF449
complex community Community=guar; Passage=4 -2.3 -1.8 +0.5 -1.2 +0.1
complex community Community=arabino-guar; Passage=4 -1.0 -0.9 -0.5 -2.5 +0.3
complex community Community=arabino-guar; Passage=4 -0.2 -2.8 -0.0 -1.1 +0.4
complex community Community=Locust bean gum; Passage=4 -1.6 -1.2 -0.2 -1.0 +0.4
complex community Community=guar; Passage=4 -0.1 -1.3 +0.6 -2.5 +0.0
complex community Community=Locust bean gum; Passage=4 -0.2 -0.8 +0.1 -2.1 -0.1
complex community Community=guar; Passage=4 -0.8 -1.7 +0.7 -1.1 -0.2
complex community Community=arabino-guar; Passage=4 -1.1 -1.5 +0.2 -0.6 -0.1
complex community Community=Locust bean gum; Passage=4 -1.1 -1.2 -0.1 -0.5 -0.1
complex community Community=Locust bean gum; Passage=4 -1.9 -0.6 -0.1 -0.0 -0.2
complex community Community=guar; Passage=4 -0.8 -1.5 +0.0 -0.5 -0.1
complex community Community=arabino-guar; Passage=4 -0.3 -1.2 -0.1 -1.6 +0.8
no phage control no phage control -0.3 +0.1 -0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 -0.2 -0.5 +0.4
phage phage_bap4 -0.1 -0.5 +0.5 -0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.1 -0.3 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 +0.2 -0.4 +0.2
phage phage_bap4 -0.2 -0.3 +0.1 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.3 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.1 -0.2 +0.4 +0.1
no phage control no phage control -0.3 -0.6 +0.3 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.4 -0.4 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.3 +0.6 -0.2
phage phage_bap4 -0.0 -0.4 +0.2 +0.7 -0.1
phage phage_bap4 +0.1 -0.3 +0.6 -0.2 +0.3
complex community Community=Kojac gum; Passage=4 +0.2 -1.1 +0.4 +0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.2 -0.1 +0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 +0.4 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 +0.4 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.4 +0.2 -0.1 +0.5
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