Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF4463 and GFF4464 are separated by 238 nucleotidesGFF4464 and GFF4465 are separated by 108 nucleotidesGFF4465 and GFF4466 are separated by 50 nucleotidesGFF4466 and GFF4467 are separated by 215 nucleotides GFF4463 - copE1, at 248,434 to 248,565 GFF4463 GFF4464 - sensor histidine kinase, at 248,804 to 249,133 GFF4464 GFF4465 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 249,242 to 249,421 GFF4465 GFF4466 - Putative HTH-type transcriptional regulator ykgD, at 249,472 to 250,326 GFF4466 GFF4467 - Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase, at 250,542 to 251,867 GFF4467
Group Condition GFF4463 GFF4464 GFF4465 GFF4466 GFF4467
lb_plus_sm_buffer LB_plus_SM_buffer N.D. -0.3 -1.0 +0.2 -0.1
lb_plus_sm_buffer LB_plus_SM_buffer N.D. -0.3 -0.4 -0.3 -0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI N.D. -0.2 -0.7 +0.1 -0.2
phage Br60_phage 15 MOI N.D. +0.1 -0.9 -0.0 -0.2
lb_plus_sm_buffer LB_plus_SM_buffer N.D. -0.3 -0.0 -0.5 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI N.D. -0.7 -0.2 +0.1 +0.1
phage LB_plus_SM_buffer with P22_phage 15 MOI N.D. -0.1 -1.0 +0.4 -0.0
nophagecontrol No phage control N.D. -0.1 -0.8 +0.2 -0.0
phage LB_plus_SM_buffer with S16_phage 15 MOI N.D. +0.1 -0.9 +0.3 -0.1
phage LB_plus_SM_buffer with 6D2_phage 15 MOI N.D. -0.2 -0.6 +0.2 +0.3
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI N.D. -0.6 +0.4 -0.0 +0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI N.D. -1.0 +0.5 +0.3 +0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI N.D. +0.1 -0.3 +0.6 -0.4
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI N.D. +0.1 +0.7 -0.4 -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 N.D. +0.1 +0.5 -0.5 +0.0
phage LB_plus_SM_buffer with 6C2_phage 15 MOI N.D. +0.2 -0.6 +0.3 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI N.D. -0.5 +0.2 +0.2 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI N.D. -0.2 -0.5 +0.8 +0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI N.D. +0.0 -0.0 +0.8 -0.6
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI N.D. -0.1 +0.6 -0.1 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI N.D. -0.3 +0.5 +0.1 +0.1
phage LB_plus_SM_buffer with 6D2_phage 15 MOI N.D. -0.1 +0.6 -0.2 +0.2
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI N.D. +0.4 +0.4 +0.1 -0.2
phage Ffm_phage 10 MOI; agar plate assay N.D. +0.2 +1.0 -0.3 +0.1
phage phi19h1_phage 15 MOI N.D. +0.5 +0.4 +0.1 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI N.D. +0.0 +0.4 +0.4 +0.4
phage LB_plus_SM_buffer with 6F2_phage 15 MOI N.D. -0.1 +1.1 +0.2 +0.1
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI N.D. +0.1 +0.5 +0.7 +0.1
phage 6F2_phage 15 MOI N.D. +0.4 +0.6 +0.6 +0.2
phage 6H2_phage 10 MOI; agar plate assay N.D. +0.7 +1.2 +0.2 -0.0
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