Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4461 and GFF4462 are separated by 66 nucleotidesGFF4462 and GFF4463 are separated by 1 nucleotidesGFF4463 and GFF4464 are separated by 0 nucleotidesGFF4464 and GFF4465 are separated by 48 nucleotides GFF4461 - hypothetical protein, at 101,487 to 103,649 GFF4461 GFF4462 - Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4), at 103,716 to 104,264 GFF4462 GFF4463 - alpha-methyl-L-serine aldolase, at 104,266 to 105,534 GFF4463 GFF4464 - hypothetical protein, at 105,535 to 105,660 GFF4464 GFF4465 - Transcriptional regulator, LysR family, at 105,709 to 106,665 GFF4465
Group Condition GFF4461 GFF4462 GFF4463 GFF4464 GFF4465
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -3.4 +0.0 N.D. +0.3
complex community Community=arabino-guar; Passage=4 +0.2 -1.4 -0.3 N.D. -1.3
complex community Community=Kojac gum; Passage=4 -1.0 -1.3 -0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.7 -1.3 -0.1 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -2.1 +0.1 N.D. -0.0
no phage control no phage control -0.2 -1.6 -0.1 N.D. -0.0
phage phage_bap4 +0.1 -2.1 -0.1 N.D. +0.2
complex community Community=guar; Passage=4 +0.4 -1.3 -0.1 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -1.7 -0.1 N.D. -0.1
complex community Community=guar; Passage=4 +0.1 -1.3 -0.2 N.D. -0.4
complex community Community=arabino-guar; Passage=4 -0.8 -1.4 +0.2 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -1.6 -0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -1.5 -0.1 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -1.3 +0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -1.5 +0.1 N.D. -0.2
phage phage_bap4 +0.0 -1.3 +0.0 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -1.4 +0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -1.4 +0.0 N.D. +0.0
complex community Community=guar; Passage=4 +0.4 -1.4 -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -1.3 -0.2 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -1.3 -0.1 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -1.1 -0.1 N.D. +0.1
complex community Community=Kojac gum; Passage=1 +0.2 -1.4 -0.2 N.D. +0.2
phage phage_bap4 +0.0 -1.3 +0.0 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -1.2 +0.5 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -1.5 +0.0 N.D. +0.4
complex community Community=arabino-guar; Passage=4 +0.5 -1.5 -0.3 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 +0.0 -1.3 -0.1 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 +0.9 -1.3 -0.2 N.D. +0.2
complex community Community=guar; Passage=4 +0.2 -1.4 +0.5 N.D. +0.3
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