Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4460 and GFF4461 are separated by 16 nucleotidesGFF4461 and GFF4462 are separated by 66 nucleotidesGFF4462 and GFF4463 are separated by 1 nucleotidesGFF4463 and GFF4464 are separated by 0 nucleotides GFF4460 - Phosphatidate cytidylyltransferase (EC 2.7.7.41), at 100,481 to 101,470 GFF4460 GFF4461 - hypothetical protein, at 101,487 to 103,649 GFF4461 GFF4462 - Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4), at 103,716 to 104,264 GFF4462 GFF4463 - alpha-methyl-L-serine aldolase, at 104,266 to 105,534 GFF4463 GFF4464 - hypothetical protein, at 105,535 to 105,660 GFF4464
Group Condition GFF4460 GFF4461 GFF4462 GFF4463 GFF4464
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.1 -3.4 +0.0 N.D.
complex community Community=Kojac gum; Passage=4 -0.3 -1.0 -1.3 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.3 -0.7 -1.3 -0.1 N.D.
phage phage_bap4 -0.1 +0.1 -2.1 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.1 -1.6 -0.1 N.D.
no phage control no phage control -0.3 -0.2 -1.6 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.7 +0.0 -1.3 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -1.4 +0.9 -1.3 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.1 -1.4 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 -2.1 +0.1 N.D.
complex community Community=guar; Passage=4 -0.5 +0.1 -1.3 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 -0.1 -1.2 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -1.7 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.3 -1.3 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 -0.8 -1.4 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -1.3 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.0 -1.5 +0.1 N.D.
phage phage_bap4 -0.3 +0.0 -1.3 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 -1.4 -0.3 N.D.
complex community Community=Kojac gum; Passage=1 -0.1 +0.2 -1.4 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.1 -1.5 +0.0 N.D.
complex community Community=guar; Passage=4 +0.1 +0.4 -1.4 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 -1.5 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 -0.2 -1.3 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.5 +0.2 -1.2 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.1 -1.0 -0.3 N.D.
phage phage_bap4 +0.3 +0.0 -1.3 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 +0.5 -1.5 -0.3 N.D.
complex community Community=guar; Passage=4 +0.2 +0.4 -1.3 -0.1 N.D.
complex community Community=guar; Passage=4 +0.3 +0.2 -1.4 +0.5 N.D.
remove
GFF4460
plot		 remove
GFF4461
plot		 remove
GFF4462		 remove
GFF4463
plot		 remove
GFF4464
plot