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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4453 and GFF4454 are separated by 6 nucleotides
GFF4454 and GFF4455 are separated by 206 nucleotides
GFF4455 and GFF4456 are separated by 143 nucleotides
GFF4456 and GFF4457 are separated by 1 nucleotides
GFF4453 - Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-), at 1,380,911 to 1,382,422
GFF4453
GFF4454 - Transcriptional regulator, LacI family, at 1,382,429 to 1,383,445
GFF4454
GFF4455 - putative exported protein, at 1,383,652 to 1,384,512
GFF4455
GFF4456 - Two-component system sensory histidine kinase, at 1,384,656 to 1,386,032
GFF4456
GFF4457 - Signal transduction response regulator, at 1,386,034 to 1,386,393
GFF4457
Group
Condition
GFF4453
GFF4454
GFF4455
GFF4456
GFF4457
carbon source
Ying_all64 rep C; time point 2
-0.7
-0.0
-0.6
-0.8
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
-0.0
-0.4
+0.1
-0.8
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.0
-0.2
+0.1
-0.9
N.D.
carbon source
Ying_all64 rep A; time point 2
-0.0
-0.1
+0.3
-1.1
N.D.
carbon source
Ying_Others16 rep C; time point 1
-0.0
-0.2
-0.4
-0.4
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
-0.4
-0.2
-0.1
N.D.
carbon source
Ying_all64 rep B; time point 1
+0.1
-0.6
-0.0
-0.3
N.D.
carbon source
Ying_sugar7 rep B; time point 1
-0.1
+0.0
+0.3
-0.9
N.D.
carbon source
Ying_sugar7 rep C; time point 1
-0.1
-0.1
+0.4
-0.9
N.D.
carbon source
Ying_all64 rep A; time point 3
+0.2
+0.1
-0.3
-0.6
N.D.
carbon source
Ying_Others16 rep B; time point 1
+0.1
-0.2
+0.2
-0.7
N.D.
carbon source
Ying_all64 rep A; time point 1
-0.5
-0.0
+0.2
-0.2
N.D.
carbon source
Ying_all64 rep C; time point 1
-0.5
-0.6
+0.4
+0.2
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.0
-0.3
+0.1
-0.4
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.4
-0.2
-0.2
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.4
+0.2
-0.3
+0.0
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.4
+0.2
-0.4
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.3
+0.1
+0.3
-0.5
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.3
+0.2
-0.4
+0.3
N.D.
carbon source
Ying_Others16 rep B; time point 3
-0.2
+0.4
-0.3
+0.3
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.2
-0.3
+0.5
+0.2
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.4
+0.0
-0.2
+0.9
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.2
+0.4
-0.2
+0.4
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.6
+0.3
+0.0
+0.8
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
-0.2
+0.2
+0.6
-0.1
N.D.
carbon source
Ying_Others16 rep C; time point 3
-0.3
+0.0
+0.2
+0.7
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.2
+0.1
-0.4
+0.9
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.2
+0.7
-0.1
+0.4
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
+0.4
-0.0
+0.6
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.3
+0.3
+0.2
+0.6
N.D.
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