Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_22740	PS417_22745	PS417_22750	PS417_22755	PS417_22760
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-4.7	-3.0	+0.2	-0.0	N.D.
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-3.3	-2.5	-0.1	+0.0	N.D.
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-2.4	-2.0	-0.1	-0.2	N.D.
solid stress	Fraxetin 3 mM; solid stress	-1.6	-3.1	+0.2	-0.0	N.D.
solid stress	Fraxetin 3 mM; solid stress	-1.9	-1.5	+0.1	+0.1	N.D.
solid stress	Fraxetin 2 mM; solid stress	-1.5	-1.6	+0.1	+0.1	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	-1.4	-1.5	+0.1	-0.0	N.D.
solid stress	Fraxetin 3 mM; solid stress	-1.7	-1.2	+0.1	+0.0	N.D.
solid stress	Fraxetin 2 mM; solid stress	-1.1	-1.6	+0.1	-0.0	N.D.
nitrogen source	Uridine (N)	-1.2	-1.3	+0.0	+0.1	N.D.
solid stress	Fraxetin 2 mM; solid stress	-1.1	-1.3	+0.1	-0.1	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	-1.1	-1.2	-0.1	-0.0	N.D.
solid stress	Fraxetin 2 mM; solid stress	-1.1	-1.3	+0.0	+0.1	N.D.
solid stress	Fraxetin 3 mM; solid stress	-1.2	-1.2	-0.0	+0.2	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	-1.0	-1.3	+0.1	+0.0	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	-1.1	-1.1	-0.0	+0.0	N.D.
solid stress	Fraxetin 2 mM; solid stress	-0.8	-1.2	+0.2	+0.0	N.D.
phage	JP1 MOI 1	-0.7	-0.7	-0.1	-0.3	N.D.
liquid stress	Fraxetin 2 mM; liquid stress	-0.7	-0.8	-0.0	-0.1	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	-1.0	-0.8	+0.1	+0.1	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.4	-0.8	-0.2	-0.2	N.D.
phage	P. simiae OR Antrim MOI 0.1	+0.1	-1.2	-0.2	-0.2	N.D.
root	root sample 6; outgrowth in LB	-1.1	-0.4	+0.4	-0.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.6	+0.1	-0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.8	+0.5	-0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.4	+0.1	+0.3	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5	-0.8	+0.1	+0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.8	-0.6	+0.2	N.D.
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7	+0.7	-0.1	+0.0	N.D.
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.3	+1.3	-0.1	-0.1	N.D.