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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4439 and GFF4440 are separated by 117 nucleotides
GFF4440 and GFF4441 are separated by 2 nucleotides
GFF4441 and GFF4442 are separated by 172 nucleotides
GFF4442 and GFF4443 are separated by 43 nucleotides
GFF4439 - Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21), at 227,330 to 227,839
GFF4439
GFF4440 - UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54), at 227,957 to 228,679
GFF4440
GFF4441 - Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8), at 228,682 to 229,176
GFF4441
GFF4442 - Cysteinyl-tRNA synthetase (EC 6.1.1.16), at 229,349 to 230,734
GFF4442
GFF4443 - Putative outer membrane protein, at 230,778 to 231,602
GFF4443
Group
Condition
GFF4439
GFF4440
GFF4441
GFF4442
GFF4443
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-1.0
N.D.
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-1.2
N.D.
N.D.
N.D.
+0.3
phage
Ffm_phage 10 MOI; agar plate assay
-0.5
N.D.
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-0.6
N.D.
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-0.7
N.D.
N.D.
N.D.
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
-0.7
N.D.
N.D.
N.D.
+0.1
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.6
N.D.
N.D.
N.D.
-0.1
micoeukaryotes
Acanthamoeba sp., muxed culture-1
-0.6
N.D.
N.D.
N.D.
+0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
-0.7
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with Ffm_phage 18.75 MOI
-0.5
N.D.
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with Ffm_phage 1.875 MOI
-0.6
N.D.
N.D.
N.D.
+0.1
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.6
N.D.
N.D.
N.D.
+0.0
phage
Br60_phage 15 MOI
-0.4
N.D.
N.D.
N.D.
-0.1
phage
phi19h1_phage 15 MOI
-0.7
N.D.
N.D.
N.D.
+0.1
phage
6F2_phage 15 MOI
-0.8
N.D.
N.D.
N.D.
+0.2
phage
6H2_phage 10 MOI; agar plate assay
-0.4
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-0.4
N.D.
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.4
N.D.
N.D.
N.D.
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.5
N.D.
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.5
N.D.
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.8
N.D.
N.D.
N.D.
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.5
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
+0.6
N.D.
N.D.
N.D.
-0.0
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.5
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.9
N.D.
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.5
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.8
N.D.
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.6
N.D.
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.8
N.D.
N.D.
N.D.
-0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.9
N.D.
N.D.
N.D.
-0.1
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