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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4433 and GFF4434 are separated by 150 nucleotides
GFF4434 and GFF4435 overlap by 4 nucleotides
GFF4435 and GFF4436 are separated by 48 nucleotides
GFF4436 and GFF4437 are separated by 56 nucleotides
GFF4433 - hypothetical protein, at 4,426,955 to 4,427,914
GFF4433
GFF4434 - integrase, at 4,428,065 to 4,429,192
GFF4434
GFF4435 - hypothetical protein, at 4,429,189 to 4,430,643
GFF4435
GFF4436 - hypothetical protein, at 4,430,692 to 4,431,795
GFF4436
GFF4437 - Chromosome (plasmid) partitioning protein ParB, at 4,431,852 to 4,432,832
GFF4437
Group
Condition
GFF4433
GFF4434
GFF4435
GFF4436
GFF4437
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.2
-0.1
-1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
+0.1
+0.1
-1.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
-0.2
-0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.0
-0.1
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.1
-0.0
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.0
+0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.1
-0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.1
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
+0.0
-0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
+0.1
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
+0.1
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.1
-0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
+0.0
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
+0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.2
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
+0.1
+0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.0
-0.0
-0.1
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