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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4430 and GFF4431 are separated by 21 nucleotides
GFF4431 and GFF4432 are separated by 4 nucleotides
GFF4432 and GFF4433 overlap by 14 nucleotides
GFF4433 and GFF4435 are separated by 35 nucleotides
GFF4430 - hypothetical protein, at 68,229 to 68,492
GFF4430
GFF4431 - Multi-sensor signal transduction histidine kinase, at 68,514 to 70,211
GFF4431
GFF4432 - Two-component system response regulator protein, at 70,216 to 71,766
GFF4432
GFF4433 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, at 71,753 to 72,364
GFF4433
GFF4435 - hypothetical protein, at 72,400 to 72,738
GFF4435
Group
Condition
GFF4430
GFF4431
GFF4432
GFF4433
GFF4435
complex community
Community=arabino-guar; Passage=4
-0.2
-0.6
-0.9
-0.5
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.4
-1.0
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
-0.5
-1.1
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.5
-1.1
-0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.5
-0.9
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.4
-1.0
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
-0.5
-0.6
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.3
-1.1
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.5
-1.0
-0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
-0.4
-0.4
-0.3
-0.0
complex community
Community=arabino-guar; Passage=4
+0.7
-0.5
-1.0
-0.4
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.3
-0.7
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.3
-0.7
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.3
-0.8
-0.3
-0.0
complex community
Community=guar; Passage=4
-0.7
-0.4
+0.4
-0.5
-0.2
complex community
Community=guar; Passage=4
-0.5
-0.7
+0.7
-0.5
-0.2
complex community
Community=arabino-guar; Passage=4
-0.3
-0.4
-0.4
+0.4
-0.3
complex community
Community=arabino-guar; Passage=4
+0.5
-0.5
-1.1
+0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.6
+0.4
-0.3
-0.2
phage
phage_bap4
-0.3
-0.3
+1.0
+0.0
+0.0
phage
phage_bap4
-0.1
-0.2
+0.9
-0.2
+0.0
phage
phage_bap4
-0.1
-0.4
+1.2
-0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.4
-0.4
+0.8
+0.5
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.4
-0.4
+1.0
-0.3
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.6
-0.1
+1.2
+0.3
-0.2
complex community
Community=guar; Passage=4
+0.3
-0.3
+0.6
+0.4
-0.2
phage
phage_bap4
-0.1
+0.1
+4.1
-0.6
-0.1
phage
phage_bap4
+0.1
+0.2
+4.1
-0.5
-0.2
phage
phage_bap4
+0.1
+0.2
+4.2
-0.6
-0.1
phage
phage_bap4
+0.2
+0.2
+4.2
-0.5
-0.2
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