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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4425 and GFF4426 are separated by 235 nucleotides
GFF4426 and GFF4427 are separated by 2 nucleotides
GFF4427 and GFF4428 are separated by 2 nucleotides
GFF4428 and GFF4429 are separated by 123 nucleotides
GFF4425 - LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator, at 4,421,400 to 4,422,305
GFF4425
GFF4426 - hypothetical protein, at 4,422,541 to 4,422,714
GFF4426
GFF4427 - FIG005935: membrane protein, at 4,422,717 to 4,423,445
GFF4427
GFF4428 - hypothetical protein, at 4,423,448 to 4,423,708
GFF4428
GFF4429 - Integral membrane protein TerC, at 4,423,832 to 4,424,812
GFF4429
Group
Condition
GFF4425
GFF4426
GFF4427
GFF4428
GFF4429
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
-0.1
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
+0.1
+0.1
-0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.1
-0.6
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
-0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
-0.0
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.2
-0.2
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.0
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.0
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
-0.3
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
+0.0
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.0
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.0
+0.5
+0.0
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