Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4424 and GFF4425 are separated by 79 nucleotidesGFF4425 and GFF4426 are separated by 118 nucleotidesGFF4426 and GFF4427 are separated by 478 nucleotidesGFF4427 and GFF4428 are separated by 153 nucleotides GFF4424 - Regulatory protein, LuxR:Tetratricopeptide TPR_4, at 1,356,304 to 1,357,218 GFF4424 GFF4425 - Transcriptional regulator, LysR family, at 1,357,298 to 1,358,245 GFF4425 GFF4426 - hypothetical protein, at 1,358,364 to 1,358,516 GFF4426 GFF4427 - Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17), at 1,358,995 to 1,359,243 GFF4427 GFF4428 - Nitrate/nitrite transporter, at 1,359,397 to 1,360,755 GFF4428
Group Condition GFF4424 GFF4425 GFF4426 GFF4427 GFF4428
carbon source Ying_all64 rep C; time point 3 -1.2 -0.0 -0.3 -1.3 -0.4
carbon source Ying_Nucleobase14 rep A; time point 2 +0.5 -0.1 -0.3 -1.9 +0.3
carbon source Ying_AminoAcid20 rep B; time point 3 -0.8 -0.0 -0.2 -0.2 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.1 +0.2 -0.1 -0.2 +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 +0.3 -0.1 -0.2 -1.1 +0.2
carbon source Ying_all64 rep A; time point 2 -0.1 +0.2 -0.2 -0.8 +0.2
carbon source Ying_all64 rep B; time point 2 +0.6 -0.2 -0.1 -0.9 +0.0
carbon source Ying_Nucleobase14 rep A; time point 1 +0.7 +0.0 -0.0 -1.2 -0.0
carbon source Ying_all64 rep C; time point 2 +0.2 +0.1 -0.2 -0.5 -0.0
carbon source Ying_all64 rep A; time point 3 -0.6 +0.1 +0.1 +0.2 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 +0.9 -0.3 -0.3 -0.3 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.3 +0.1 +0.3 -0.9 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.3 -0.1 +0.2 -0.6 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.7 +0.1 -0.1 -0.6 +0.0
carbon source Ying_sugar7 rep A; time point 2 +0.6 -0.0 +0.1 -0.6 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.4 +0.2 -0.0 -0.6 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.8 -0.1 +0.1 -0.6 +0.1
carbon source Ying_all64 rep C; time point 1 +1.0 +0.2 -0.2 -0.8 +0.2
carbon source Ying_all64 rep B; time point 3 -0.4 +0.2 -0.2 +0.5 +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.7 -0.2 -0.2 -0.2 +0.2
carbon source Ying_sugar7 rep C; time point 2 +0.9 +0.1 -0.3 -0.6 +0.3
carbon source Ying_sugar7 rep C; time point 3 -0.2 +0.1 +0.3 +0.5 -0.3
carbon source Ying_Nucleobase14 rep B; time point 1 +1.1 +0.2 +0.1 -1.0 +0.2
carbon source Ying_sugar7 rep C; time point 1 +0.7 -0.0 +0.2 -0.3 +0.3
carbon source Ying_Others16 rep B; time point 2 +0.9 +0.2 +0.1 -0.4 +0.0
carbon source Ying_AminoAcid20 rep B; time point 1 +0.9 +0.1 +0.0 -0.2 +0.1
carbon source Ying_Nucleobase14 rep B; time point 2 +0.6 +0.0 +0.2 -0.1 +0.2
carbon source Ying_Others16 rep A; time point 3 +0.3 +0.4 -0.1 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 +0.2 +0.4 +0.5 +0.0
carbon source Ying_all64 rep A; time point 1 +1.2 +0.1 +0.0 +0.1 +0.3
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