Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_02245 and PS417_02250 overlap by 1 nucleotidesPS417_02250 and PS417_02255 overlap by 4 nucleotidesPS417_02255 and PS417_02260 overlap by 1 nucleotidesPS417_02260 and PS417_02265 are separated by 118 nucleotides PS417_02245: PS417_02245 - heptose kinase, at 511,568 to 512,374 _02245 PS417_02250: PS417_02250 - heptose kinase, at 512,374 to 513,108 _02250 PS417_02255: PS417_02255 - lipopolysaccharide kinase, at 513,105 to 513,857 _02255 PS417_02260: PS417_02260 - serine/threonine protein kinase, at 513,857 to 515,296 _02260 PS417_02265: PS417_02265 - TonB-dependent receptor, at 515,415 to 517,499 _02265
Group Condition PS417_02245 PS417_02250 PS417_02255 PS417_02260 PS417_02265
solid stress Fraxetin 3 mM; solid stress N.D. N.D. -6.7 N.D. +0.2
solid stress Fraxetin 2 mM; solid stress N.D. N.D. -5.7 N.D. -0.1
stress R2A with Fusaric 120 ug/mL N.D. N.D. -5.3 N.D. -0.3
carbon source octanoate (C) N.D. N.D. -4.8 N.D. +0.1
solid stress Fraxetin 3 mM; solid stress N.D. N.D. -4.4 N.D. -0.1
stress R2A with Fusaric 120 ug/mL N.D. N.D. -4.2 N.D. -0.1
solid stress Fraxetin 3 mM; solid stress N.D. N.D. -4.1 N.D. -0.1
stress Doxycycline hyclate 0.001 mg/ml N.D. N.D. -4.1 N.D. +0.0
solid stress Fraxetin 2 mM; solid stress N.D. N.D. -4.0 N.D. +0.0
stress Nalidixic 0.025 mg/ml N.D. N.D. -3.8 N.D. -0.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -3.8 N.D. +0.2
solid stress Fraxetin 3 mM; solid stress N.D. N.D. -3.5 N.D. -0.1
liquid stress Fraxetin 3 mM; liquid stress N.D. N.D. -3.1 N.D. +0.0
stress R2A with Fusaric 120 ug/mL N.D. N.D. -3.0 N.D. +0.0
solid stress Fraxetin 2 mM; solid stress N.D. N.D. -2.9 N.D. +0.1
carbon source octanoate (C) N.D. N.D. -2.9 N.D. +0.1
stress R2A with Fusaric 120 ug/mL N.D. N.D. -2.5 N.D. -0.2
solid stress Fraxetin 2 mM; solid stress N.D. N.D. -2.6 N.D. -0.0
stress R2A with Fusaric 120 ug/mL N.D. N.D. -2.3 N.D. -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -2.3 N.D. -0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -2.5 N.D. +0.2
stress Tetracycline 0.001 mg/ml N.D. N.D. -2.4 N.D. +0.1
solid stress Fraxetin 0.5 mM; solid stress N.D. N.D. -2.2 N.D. +0.0
solid stress Fraxetin 1 mM; solid stress N.D. N.D. -2.2 N.D. +0.1
liquid stress Fraxetin 2 mM; liquid stress N.D. N.D. -1.9 N.D. +0.1
soil soil sample 7; outgrowth in LB N.D. N.D. -1.8 N.D. +0.1
liquid stress Fraxetin 3 mM; liquid stress N.D. N.D. -1.9 N.D. +0.2
solid stress Scopoletin 3 mM; solid stress N.D. N.D. -1.8 N.D. +0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.8 N.D. +0.3
stress Neomycin 0.04 mg/ml N.D. N.D. +4.4 N.D. -0.0
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