Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_22615 and PS417_22620 are separated by 173 nucleotidesPS417_22620 and PS417_22625 are separated by 56 nucleotidesPS417_22625 and PS417_22630 are separated by 30 nucleotidesPS417_22630 and PS417_22635 are separated by 216 nucleotides PS417_22615: PS417_22615 - hypothetical protein, at 4,896,850 to 4,897,224 _22615 PS417_22620: PS417_22620 - pyruvate kinase, at 4,897,398 to 4,898,849 _22620 PS417_22625: PS417_22625 - enoyl-CoA hydratase, at 4,898,906 to 4,899,655 _22625 PS417_22630: PS417_22630 - hypothetical protein, at 4,899,686 to 4,900,618 _22630 PS417_22635: PS417_22635 - fumarate hydratase, at 4,900,835 to 4,902,358 _22635
Group Condition PS417_22615 PS417_22620 PS417_22625 PS417_22630 PS417_22635
nitrogen source Adenine (N) -0.8 -4.0 +0.1 -0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -3.0 -0.1 -1.0 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.1 -4.6 +0.2 -0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.2 -3.6 +0.0 -0.4 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -2.4 -0.0 -0.1 N.D.
carbon source D-Glucose (C) -0.7 -2.5 +0.1 -0.4 N.D.
phage Wcs_1 -0.4 -2.4 -0.4 -0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.0 -3.4 -0.1 +0.4 N.D.
carbon source D-Glucose (C) -0.7 -2.2 -0.2 +0.2 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -3.0 +0.2 +0.2 N.D.
nitrogen source Ammonium chloride (N) -0.5 -2.5 +0.0 +0.4 N.D.
stress Gentamicin 0.008 mg/ml -1.4 -2.1 -0.3 +1.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 -3.3 -0.1 +0.7 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 -2.5 -0.1 +0.7 N.D.
stress 2-Furfuraldehyde 0.03 vol% -0.3 -2.2 -0.2 +0.7 N.D.
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -2.7 +0.4 +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 -2.7 -0.0 +0.5 N.D.
solid stress Fraxetin 3 mM; solid stress +0.1 -2.3 -0.1 +0.9 N.D.
stress Spectinomycin 0.4 mg/ml -0.1 -1.9 -0.2 +1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.7 +0.4 +0.7 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -2.4 +0.3 +1.2 N.D.
solid stress Fraxetin 3 mM; solid stress +0.2 -2.3 +0.4 +0.9 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 -2.9 +0.2 +1.4 N.D.
phage P. simiae OR Antrim MOI 0.1 +0.5 +1.7 +0.1 -1.1 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 -0.7 +1.0 +1.9 N.D.
carbon source NAG (C) -0.1 +2.5 -0.1 +0.7 N.D.
phage JP1 MOI 10 -0.1 +1.8 +0.2 +2.0 N.D.
stress Phosphomycin 0.001 mg/ml +0.8 +6.1 +0.2 +0.3 N.D.
stress Phosphomycin 0.002 mg/ml +1.3 +6.7 +0.0 -0.5 N.D.
stress Phosphomycin 0.003 mg/ml +1.4 +6.7 +0.2 -0.2 N.D.
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