Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_22605	PS417_22610	PS417_22615	PS417_22620	PS417_22625
stress	Gentamicin 0.008 mg/ml	-0.4	-0.5	-1.4	-2.1	-0.3
nitrogen source	Adenine (N)	-0.0	+0.2	-0.8	-4.0	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.3	-1.7	-2.4	-0.0
phage	Wcs_1	-0.7	-0.5	-0.4	-2.4	-0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.0	-0.0	+0.1	-4.6	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.3	-0.6	-3.0	-0.1
solid stress	Fraxetin 3 mM; solid stress	-0.0	-1.1	-0.2	-2.6	+0.2
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.1	+0.3	-0.2	-3.6	+0.0
carbon source	2-Deoxy-D-ribonic lithium salt (C)	+0.1	+0.0	-0.0	-3.4	-0.1
carbon source	D-Glucose (C)	-0.1	-0.2	-0.7	-2.5	+0.1
carbon source	D-Glucose (C)	+0.2	-0.3	-0.7	-2.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.5	-0.9	-1.9	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.0	+0.6	-3.3	-0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	-1.2	-0.0	-1.8	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.5	-0.1	-2.5	-0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.7	+0.5	-2.7	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-1.9	+0.2	-0.9	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-0.5	+0.3	-2.5	-0.1
solid stress	Fraxetin 3 mM; solid stress	+0.1	-0.5	+0.2	-2.3	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.9	-0.2	-3.0	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.1	+0.6	-2.9	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+0.1	-0.9	-1.5	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.6	+0.8	-2.7	-0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+0.5	-0.6	-1.7	+0.4
soil	soil sample 5; outgrowth in LB	+0.4	+1.7	-0.1	-1.0	-0.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.5	+0.7	+0.7	-0.7	+1.0
phage	JP1 MOI 10	+0.3	+0.9	-0.1	+1.8	+0.2
stress	Phosphomycin 0.001 mg/ml	+0.1	-0.4	+0.8	+6.1	+0.2
stress	Phosphomycin 0.003 mg/ml	-0.1	-0.4	+1.4	+6.7	+0.2
stress	Phosphomycin 0.002 mg/ml	+0.3	-0.1	+1.3	+6.7	+0.0