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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4413 and GFF4414 are separated by 151 nucleotides
GFF4414 and GFF4415 are separated by 227 nucleotides
GFF4415 and GFF4416 are separated by 376 nucleotides
GFF4416 and GFF4417 overlap by 4 nucleotides
GFF4413 - hypothetical protein, at 4,410,888 to 4,411,268
GFF4413
GFF4414 - hypothetical protein, at 4,411,420 to 4,412,496
GFF4414
GFF4415 - Integration host factor beta subunit, at 4,412,724 to 4,413,017
GFF4415
GFF4416 - Transcriptional regulator, ArsR family, at 4,413,394 to 4,413,768
GFF4416
GFF4417 - Alkyl hydroperoxide reductase subunit C-like protein, at 4,413,765 to 4,414,388
GFF4417
Group
Condition
GFF4413
GFF4414
GFF4415
GFF4416
GFF4417
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.2
-0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.3
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.1
-0.1
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.0
-0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
-0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
-0.3
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.1
-0.4
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.0
+0.2
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
-0.2
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
+0.0
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
-0.0
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.1
+0.1
-0.0
-0.1
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