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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GFF4395 and GFF4396 are separated by 223 nucleotides
GFF4396 and GFF4397 are separated by 130 nucleotides
GFF4397 and GFF4398 overlap by 4 nucleotides
GFF4398 and GFF4399 overlap by 4 nucleotides
GFF4395 - hypothetical protein, at 4,396,652 to 4,396,909
GFF4395
GFF4396 - hypothetical protein, at 4,397,133 to 4,397,552
GFF4396
GFF4397 - hypothetical protein, at 4,397,683 to 4,398,756
GFF4397
GFF4398 - RND efflux system, inner membrane transporter, at 4,398,753 to 4,401,848
GFF4398
GFF4399 - Type I secretion outer membrane protein, TolC family, at 4,401,845 to 4,403,179
GFF4399
Group
Condition
GFF4395
GFF4396
GFF4397
GFF4398
GFF4399
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.7
-0.4
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.6
-0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.4
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.5
-0.1
-0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.1
-0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.0
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
+0.1
-0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.3
+0.0
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
-0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
-0.3
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.1
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.3
-0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
+0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
-0.2
-0.1
-0.0
-0.2
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