Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF436 and GFF437 are separated by 193 nucleotidesGFF437 and GFF438 overlap by 40 nucleotidesGFF438 and GFF439 overlap by 4 nucleotidesGFF439 and GFF440 are separated by 21 nucleotides GFF436 - LrgA-associated membrane protein LrgB, at 473,863 to 474,594 GFF436 GFF437 - Antiholin-like protein LrgA, at 474,788 to 475,210 GFF437 GFF438 - L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81), at 475,171 to 476,187 GFF438 GFF439 - Adenosylcobinamide-phosphate synthase (EC 6.3.1.10), at 476,184 to 477,161 GFF439 GFF440 - CobN-like chelatase BtuS for metalloporphyrine salvage, at 477,183 to 481,196 GFF440
Group Condition GFF436 GFF437 GFF438 GFF439 GFF440
complex community Community=guar; Passage=4 -0.2 -0.6 -1.3 -1.2 -0.5
complex community Community=Locust bean gum; Passage=4 -0.7 -0.3 -0.9 -0.8 -0.7
complex community Community=guar; Passage=4 +0.6 -0.5 -1.4 -1.2 -0.4
complex community Community=guar; Passage=4 -0.4 -0.3 -0.7 -0.6 -0.7
complex community Community=Locust bean gum; Passage=4 +0.7 -0.6 -1.1 -1.3 -0.4
complex community Community=arabino-guar; Passage=4 +0.1 -0.2 -1.8 -0.7 -0.1
complex community Community=guar; Passage=4 -0.1 -0.2 -0.8 -1.0 -0.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 -0.5 -0.4 -0.4
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 -0.5 -0.5 -0.4
complex community Community=Locust bean gum; Passage=4 +1.4 -0.6 -0.5 -1.2 -0.3
phage phage_bap4 -0.0 -0.8 -0.1 +0.0 -0.0
complex community Community=arabino-guar; Passage=4 +0.9 -0.8 -0.1 -0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.3 -0.4 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.2 +0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.4 -0.1 +0.3 +0.1
phage phage_bap4 +0.2 -0.3 -0.2 +0.1 +0.0
complex community Community=Locust bean gum; Passage=1 +0.1 -0.4 +0.1 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +1.3 +0.1 -0.5 -0.4 -0.5
complex community Community=Kojac gum; Passage=4 +0.1 +0.3 -0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 -0.0 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.3 -0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.2 -0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 +0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.0 -0.1 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.2 +0.0 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 +0.1 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -0.0 +0.3 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 -0.3 +0.3 +0.1 +0.1
no phage control no phage control +0.5 +0.2 -0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.4 +0.0 +0.3 +0.1
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