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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4352 and GFF4353 are separated by 48 nucleotides
GFF4353 and GFF4354 are separated by 6 nucleotides
GFF4354 and GFF4355 overlap by 7 nucleotides
GFF4355 and GFF4356 are separated by 193 nucleotides
GFF4352 - tmRNA-binding protein SmpB, at 1,282,483 to 1,282,977
GFF4352
GFF4353 - Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W, at 1,283,026 to 1,283,472
GFF4353
GFF4354 - UPF0125 protein yfjF, at 1,283,479 to 1,283,808
GFF4354
GFF4355 - PROBABLE TRANSMEMBRANE PROTEIN, at 1,283,802 to 1,284,353
GFF4355
GFF4356 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 1,284,547 to 1,286,016
GFF4356
Group
Condition
GFF4352
GFF4353
GFF4354
GFF4355
GFF4356
carbon source
Ying_all64 rep A; time point 2
N.D.
-0.2
N.D.
-0.3
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
N.D.
-0.2
N.D.
-0.3
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
N.D.
-0.5
N.D.
+0.0
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
N.D.
-0.2
N.D.
-0.2
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
N.D.
+0.3
N.D.
-0.7
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
N.D.
-0.3
N.D.
-0.1
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
N.D.
-0.5
N.D.
+0.1
N.D.
carbon source
Ying_all64 rep A; time point 1
N.D.
-0.1
N.D.
-0.3
N.D.
carbon source
Ying_all64 rep A; time point 3
N.D.
-0.3
N.D.
+0.1
N.D.
carbon source
Ying_all64 rep B; time point 3
N.D.
-0.4
N.D.
+0.3
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
N.D.
-0.4
N.D.
+0.3
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
-0.3
N.D.
+0.3
N.D.
carbon source
Ying_all64 rep C; time point 2
N.D.
+0.2
N.D.
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
N.D.
-0.1
N.D.
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
N.D.
-0.2
N.D.
+0.5
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
N.D.
-0.2
N.D.
+0.4
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
N.D.
+0.0
N.D.
+0.3
N.D.
carbon source
Ying_Others16 rep A; time point 1
N.D.
+0.2
N.D.
+0.1
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
N.D.
+0.1
N.D.
+0.3
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
N.D.
-0.1
N.D.
+0.5
N.D.
carbon source
Ying_sugar7 rep C; time point 1
N.D.
+0.3
N.D.
+0.2
N.D.
carbon source
Ying_sugar7 rep B; time point 3
N.D.
-0.1
N.D.
+0.6
N.D.
carbon source
Ying_Others16 rep B; time point 1
N.D.
+0.0
N.D.
+0.5
N.D.
carbon source
Ying_sugar7 rep A; time point 1
N.D.
+0.1
N.D.
+0.5
N.D.
carbon source
Ying_Others16 rep C; time point 3
N.D.
-0.2
N.D.
+0.7
N.D.
carbon source
Ying_sugar7 rep C; time point 3
N.D.
-0.0
N.D.
+0.6
N.D.
carbon source
Ying_sugar7 rep A; time point 3
N.D.
+0.1
N.D.
+0.5
N.D.
carbon source
Ying_all64 rep C; time point 3
N.D.
+0.5
N.D.
+0.1
N.D.
carbon source
Ying_Others16 rep A; time point 3
N.D.
+0.5
N.D.
+0.4
N.D.
carbon source
Ying_Others16 rep B; time point 3
N.D.
+0.2
N.D.
+0.8
N.D.
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