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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4350 and GFF4351 are separated by 228 nucleotides
GFF4351 and GFF4352 are separated by 58 nucleotides
GFF4352 and GFF4353 are separated by 129 nucleotides
GFF4353 and GFF4354 are separated by 94 nucleotides
GFF4350 - hypothetical protein, at 4,349,719 to 4,350,987
GFF4350
GFF4351 - Transcriptional regulator, LysR family, at 4,351,216 to 4,352,331
GFF4351
GFF4352 - Hydroxylamine reductase (EC 1.7.99.1), at 4,352,390 to 4,354,030
GFF4352
GFF4353 - Nitrite-sensitive transcriptional repressor NsrR, at 4,354,160 to 4,354,606
GFF4353
GFF4354 - hypothetical protein, at 4,354,701 to 4,354,865
GFF4354
Group
Condition
GFF4350
GFF4351
GFF4352
GFF4353
GFF4354
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
+0.1
+0.5
-1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.0
+0.5
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
+0.0
+0.4
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.0
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.0
+0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
+0.1
-0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.0
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
-0.0
+0.5
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
+0.0
+0.0
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
-0.0
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.0
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
+0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
-0.1
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
-0.0
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.0
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
-0.2
+0.5
+0.5
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