Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4349 and GFF4350 are separated by 16 nucleotidesGFF4350 and GFF4351 are separated by 22 nucleotidesGFF4351 and GFF4352 are separated by 92 nucleotidesGFF4352 and GFF4353 are separated by 48 nucleotides GFF4349 - Transmembrane regulator protein PrtR, at 1,280,622 to 1,281,440 GFF4349 GFF4350 - RNA polymerase sigma-54 factor RpoN, at 1,281,457 to 1,281,990 GFF4350 GFF4351 - Orf21; putative lipoprotein, at 1,282,013 to 1,282,390 GFF4351 GFF4352 - tmRNA-binding protein SmpB, at 1,282,483 to 1,282,977 GFF4352 GFF4353 - Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W, at 1,283,026 to 1,283,472 GFF4353
Group Condition GFF4349 GFF4350 GFF4351 GFF4352 GFF4353
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.3 +0.0 -0.1 N.D. -0.4
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 -0.0 -0.2 N.D. -0.3
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 +0.1 +0.0 N.D. -0.5
carbon source Ying_sugar7 rep A; time point 2 -0.2 -0.1 -0.2 N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.2 -0.2 +0.1 N.D. -0.1
carbon source Ying_all64 rep A; time point 3 -0.1 -0.1 +0.1 N.D. -0.3
carbon source Ying_all64 rep B; time point 3 +0.0 -0.1 +0.1 N.D. -0.4
carbon source Ying_Nucleobase14 rep C; time point 2 -0.0 +0.1 +0.1 N.D. -0.5
carbon source Ying_Others16 rep C; time point 2 -0.3 -0.0 +0.1 N.D. -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.3 +0.1 -0.3 N.D. +0.3
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 +0.1 -0.0 N.D. +0.1
carbon source Ying_Others16 rep C; time point 1 -0.1 -0.1 -0.1 N.D. +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 -0.0 -0.1 N.D. +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 -0.0 +0.0 N.D. -0.3
carbon source Ying_Others16 rep B; time point 2 -0.0 +0.1 +0.1 N.D. -0.1
carbon source Ying_all64 rep A; time point 1 +0.2 +0.1 -0.1 N.D. -0.1
carbon source Ying_sugar7 rep C; time point 2 -0.0 -0.1 -0.1 N.D. +0.2
carbon source Ying_AminoAcid20 rep A; time point 1 +0.1 +0.1 -0.1 N.D. -0.1
carbon source Ying_sugar7 rep A; time point 1 -0.2 +0.2 +0.0 N.D. +0.1
carbon source Ying_all64 rep A; time point 2 +0.0 +0.2 +0.0 N.D. -0.2
carbon source Ying_Others16 rep C; time point 3 +0.1 +0.1 +0.0 N.D. -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 +0.2 +0.1 +0.1 N.D. -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 +0.0 +0.1 +0.2 N.D. -0.2
carbon source Ying_sugar7 rep C; time point 1 -0.2 +0.1 -0.1 N.D. +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 +0.1 +0.2 N.D. -0.2
carbon source Ying_sugar7 rep A; time point 3 +0.1 +0.1 -0.1 N.D. +0.1
carbon source Ying_all64 rep C; time point 2 +0.2 -0.1 -0.0 N.D. +0.2
carbon source Ying_Others16 rep A; time point 3 -0.2 +0.1 +0.1 N.D. +0.5
carbon source Ying_Others16 rep B; time point 3 +0.2 -0.1 +0.1 N.D. +0.2
carbon source Ying_all64 rep C; time point 3 +0.0 -0.1 +0.1 N.D. +0.5
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