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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4334 and GFF4335 are separated by 21 nucleotides
GFF4335 and GFF4336 are separated by 32 nucleotides
GFF4336 and GFF4337 are separated by 46 nucleotides
GFF4337 and GFF4338 are separated by 2 nucleotides
GFF4334 - Enoyl-CoA hydratase (EC 4.2.1.17), at 257,581 to 258,378
GFF4334
GFF4335 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1), at 258,400 to 259,554
GFF4335
GFF4336 - BUG/TctC family periplasmic protein, at 259,587 to 260,573
GFF4336
GFF4337 - Electron transfer flavoprotein, alpha subunit, at 260,620 to 261,552
GFF4337
GFF4338 - Electron transfer flavoprotein, beta subunit, at 261,555 to 262,304
GFF4338
Group
Condition
GFF4334
GFF4335
GFF4336
GFF4337
GFF4338
complex community
Community=Locust bean gum; Passage=4
-0.9
N.D.
-0.9
-2.9
N.D.
complex community
Community=arabino-guar; Passage=4
-1.8
N.D.
-1.3
+0.1
N.D.
complex community
Community=Kojac gum; Passage=4
-1.3
N.D.
-1.2
+0.7
N.D.
phage
phage_bap4
-1.0
N.D.
-0.4
-0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
-3.2
N.D.
+1.2
+0.8
N.D.
complex community
Community=Locust bean gum; Passage=1
-0.8
N.D.
+0.0
-0.3
N.D.
phage
phage_bap4
-0.1
N.D.
-0.8
-0.1
N.D.
complex community
Community=guar; Passage=4
-0.2
N.D.
-0.9
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.2
N.D.
-1.0
+0.6
N.D.
phage
phage_bap4
-1.0
N.D.
+0.4
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
N.D.
-0.7
+0.2
N.D.
complex community
Community=guar; Passage=4
-0.9
N.D.
+0.4
+0.3
N.D.
complex community
Community=arabino-guar; Passage=4
+0.2
N.D.
+0.3
-0.5
N.D.
complex community
Community=guar; Passage=4
+0.1
N.D.
+0.6
-0.5
N.D.
complex community
Community=guar; Passage=4
-0.6
N.D.
+0.2
+0.7
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
N.D.
+0.6
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.6
N.D.
+0.7
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.7
N.D.
+0.8
+0.5
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.1
N.D.
+0.5
+0.5
N.D.
complex community
Community=arabino-guar; Passage=4
+0.6
N.D.
-0.2
+0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.6
N.D.
+0.1
+0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
N.D.
+0.3
+0.7
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.4
N.D.
+0.5
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
N.D.
+0.6
+0.6
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
N.D.
+0.6
+0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.3
N.D.
+0.7
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.6
N.D.
+0.1
+0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.5
N.D.
+0.6
+0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
N.D.
+0.6
+0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.9
N.D.
+0.6
+0.5
N.D.
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