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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4316 and GFF4317 are separated by 44 nucleotides
GFF4317 and GFF4318 are separated by 3 nucleotides
GFF4318 and GFF4319 are separated by 88 nucleotides
GFF4319 and GFF4320 are separated by 20 nucleotides
GFF4316 - hypothetical protein, at 99,484 to 99,630
GFF4316
GFF4317 - Ribonucleotide reductase transcriptional regulator NrdR, at 99,675 to 100,052
GFF4317
GFF4318 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193), at 100,056 to 101,159
GFF4318
GFF4319 - 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78), at 101,248 to 101,718
GFF4319
GFF4320 - Transcription termination protein NusB, at 101,739 to 102,158
GFF4320
Group
Condition
GFF4316
GFF4317
GFF4318
GFF4319
GFF4320
phage
Ffm_phage 10 MOI; agar plate assay
-1.9
-1.4
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-1.0
-1.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-0.7
-1.4
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
-0.6
-1.4
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
-0.7
-1.2
N.D.
N.D.
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-1.0
-0.8
N.D.
N.D.
N.D.
phage
6F2_phage 15 MOI
-0.7
-0.6
N.D.
N.D.
N.D.
phage
6H2_phage 10 MOI; agar plate assay
-0.5
-0.8
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
-0.9
-0.4
N.D.
N.D.
N.D.
phage
6F2_phage 15 MOI
-0.5
-0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-0.5
-0.7
N.D.
N.D.
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.5
-0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-0.1
-1.1
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-0.7
-0.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.1
-1.1
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
+0.0
-1.0
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
+0.1
-0.9
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.5
-0.8
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.4
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+1.0
-0.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.1
+0.8
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+1.1
-0.1
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+1.0
+0.1
N.D.
N.D.
N.D.
phage
phi19h1_phage 15 MOI
+1.1
+0.2
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.8
+0.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.8
+0.6
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.8
+0.8
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.3
+0.9
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.9
+1.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.9
+1.5
N.D.
N.D.
N.D.
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