Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4299 and GFF4300 overlap by 1 nucleotidesGFF4300 and GFF4301 are separated by 139 nucleotidesGFF4301 and GFF4302 are separated by 42 nucleotidesGFF4302 and GFF4303 are separated by 145 nucleotides GFF4299 - 3-ketoacyl-CoA thiolase, at 218,005 to 219,210 GFF4299 GFF4300 - Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase, at 219,210 to 220,691 GFF4300 GFF4301 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 220,831 to 221,745 GFF4301 GFF4302 - hypothetical protein AF1210, at 221,788 to 222,720 GFF4302 GFF4303 - Transcriptional regulator, MarR family, at 222,866 to 223,330 GFF4303
Group Condition GFF4299 GFF4300 GFF4301 GFF4302 GFF4303
complex community Community=guar; Passage=4 +0.3 -0.3 -1.3 -0.6 N.D.
complex community Community=guar; Passage=4 +0.6 -0.4 -1.3 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.8 +0.0 -0.9 N.D.
complex community Community=guar; Passage=4 -1.5 -0.5 -0.0 +0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.0 +0.1 -0.8 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 -0.8 -0.2 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -1.7 +1.0 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.2 -0.9 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 +0.7 -1.8 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.2 -0.7 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 -0.4 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.2 +0.0 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 -0.0 -1.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.2 -0.4 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 -0.7 +0.0 N.D.
phage phage_bap4 -0.4 +0.2 +0.3 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 +0.5 -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 -1.0 +0.1 +1.0 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.3 +0.6 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.1 +0.4 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.1 +0.8 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 -0.1 +0.2 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.6 -0.8 +0.6 -0.1 N.D.
complex community Community=Kojac gum; Passage=1 +0.4 -0.1 +0.3 -0.3 N.D.
phage phage_bap4 -0.2 +0.0 +0.7 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 +0.0 +0.3 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.2 +0.8 -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +1.2 -0.0 -0.6 +0.4 N.D.
phage phage_bap4 +0.4 +0.1 +0.7 +0.2 N.D.
complex community Community=Kojac gum; Passage=4 +1.2 +0.2 -0.4 +0.8 N.D.
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