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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4293 and GFF4294 are separated by 3 nucleotides
GFF4294 and GFF4295 are separated by 45 nucleotides
GFF4295 and GFF4296 are separated by 68 nucleotides
GFF4296 and GFF4297 are separated by 119 nucleotides
GFF4293 - hypothetical protein, at 4,302,595 to 4,302,816
GFF4293
GFF4294 - DNA-binding protein HU-beta, at 4,302,820 to 4,303,104
GFF4294
GFF4295 - Uncharacterized conserved protein, at 4,303,150 to 4,303,770
GFF4295
GFF4296 - hypothetical protein, at 4,303,839 to 4,304,201
GFF4296
GFF4297 - hypothetical protein, at 4,304,321 to 4,304,581
GFF4297
Group
Condition
GFF4293
GFF4294
GFF4295
GFF4296
GFF4297
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.4
+0.4
+0.0
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.0
-0.1
-1.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.0
-0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.8
+0.0
-0.1
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
+0.3
+0.1
+0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
-0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.6
-0.1
-0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
-0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.0
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.2
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.6
+0.0
+0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.2
-0.1
-0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.7
-0.0
+0.0
+0.0
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