Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4289 and GFF4290 overlap by 1 nucleotidesGFF4290 and GFF4291 are separated by 111 nucleotidesGFF4291 and GFF4292 are separated by 6 nucleotidesGFF4292 and GFF4293 overlap by 4 nucleotides GFF4289 - Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 209,701 to 210,594 GFF4289 GFF4290 - MaoC-like dehydratase, at 210,594 to 211,052 GFF4290 GFF4291 - Putative oxidoreductase YncB, at 211,164 to 212,189 GFF4291 GFF4292 - no description, at 212,196 to 212,675 GFF4292 GFF4293 - 4-hydroxybutyrate coenzyme A transferase, at 212,672 to 213,916 GFF4293
Group Condition GFF4289 GFF4290 GFF4291 GFF4292 GFF4293
complex community Community=guar; Passage=4 N.D. -1.0 -0.5 -6.5 N.D.
complex community Community=guar; Passage=4 N.D. +0.4 +0.0 -6.2 N.D.
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.2 -3.7 N.D.
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -1.2 -0.9 N.D.
complex community Community=arabino-guar; Passage=4 N.D. +0.1 +0.7 -2.0 N.D.
complex community Community=Kojac gum; Passage=4 N.D. +0.6 -0.5 -1.2 N.D.
phage phage_bap4 N.D. +0.3 -0.3 -0.7 N.D.
phage phage_bap4 N.D. +0.1 -0.2 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.3 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.7 +0.3 N.D.
complex community Community=guar; Passage=4 N.D. -0.1 -0.8 +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 +0.4 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.5 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -0.5 +0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.4 -0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.5 +0.3 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.5 +0.5 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.7 +1.1 N.D.
phage phage_bap4 N.D. +0.2 +0.3 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.3 +0.7 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.3 +0.3 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 +0.3 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 +0.1 +0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.3 +0.4 N.D.
complex community Community=guar; Passage=4 N.D. -0.1 -0.0 +0.8 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 +0.0 +0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.3 +0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.2 +0.3 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.4 +0.4 +0.8 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 +0.6 +0.4 N.D.
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