Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF427 and GFF428 overlap by 8 nucleotidesGFF428 and GFF429 overlap by 4 nucleotidesGFF429 and GFF430 are separated by 3 nucleotidesGFF430 and GFF431 are separated by 11 nucleotides GFF427 - L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) homolog, at 149,107 to 149,967 GFF427 GFF428 - 3-keto-L-gulonate 6-phosphate decarboxylase homolog, at 149,960 to 150,622 GFF428 GFF429 - L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-), at 150,619 to 152,115 GFF429 GFF430 - 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor, at 152,119 to 153,105 GFF430 GFF431 - 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN, at 153,117 to 154,394 GFF431
Group Condition GFF427 GFF428 GFF429 GFF430 GFF431
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 -0.7 -0.1 -0.2 -0.5
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.2 -0.8 -0.2 -0.0 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.2 -0.3 -0.3 -0.2 -0.3
phage phi19h1_phage 15 MOI -0.3 -0.5 +0.1 -0.4 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.1 -0.5 -0.1 -0.2 -0.2
phage LB_plus_SM_buffer with Ffm_phage 15 MOI -0.4 -0.3 -0.3 +0.2 -0.2
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI -0.1 -0.6 +0.0 -0.1 -0.2
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.0 -0.4 -0.2 -0.1 -0.2
phage 6F2_phage 15 MOI -0.9 -0.3 +0.0 +0.1 +0.1
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI -0.2 -0.4 -0.1 +0.2 -0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI -0.3 +0.1 -0.5 +0.1 +0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.7 -0.1 -0.2 +0.3 +0.0
phage LB_plus_SM_buffer with 6C2_phage 15 MOI +0.3 -0.4 -0.2 -0.1 -0.1
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.1 +0.2 -0.2 -0.2 -0.2
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.3 -0.2 -0.3 +0.0 -0.0
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.2 +0.1 -0.2 +0.3 -0.2
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.4 -0.5 -0.1 +0.3 -0.3
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.1 -0.2 -0.2 +0.3 -0.2
phage LB_plus_SM_buffer with Ffm_phage 0.1875 MOI -0.4 +0.1 +0.3 +0.1 -0.2
phage Br60_phage 15 MOI +0.4 -0.4 -0.1 -0.1 +0.1
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.0 -0.3 +0.5 -0.4 +0.1
phage Ffm_phage 10 MOI; agar plate assay +0.5 -0.0 +0.2 -0.4 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.3 +0.2 -0.2 -0.0 -0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.6 -0.1 -0.4 -0.1 +0.0
nophagecontrol No phage control +0.2 -0.6 +0.2 +0.1 +0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.5 +0.0 -0.2 -0.2 -0.0
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.7 -0.1 -0.2 -0.1 +0.0
phage LB_plus_SM_buffer with Br60_phage 0.00005 MOI -0.2 +0.1 -0.1 +0.3 +0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.5 -0.1 +0.1 +0.1 -0.2
phage 6F2_phage 15 MOI +0.3 +0.4 -0.0 -0.1 +0.4
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