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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4286 and GFF4287 are separated by 83 nucleotides
GFF4287 and GFF4288 overlap by 1 nucleotides
GFF4288 and GFF4289 are separated by 554 nucleotides
GFF4289 and GFF4290 are separated by 7 nucleotides
GFF4286 - hypothetical protein, at 4,297,514 to 4,297,816
GFF4286
GFF4287 - hypothetical protein, at 4,297,900 to 4,298,532
GFF4287
GFF4288 - hypothetical protein, at 4,298,532 to 4,299,053
GFF4288
GFF4289 - Error-prone, lesion bypass DNA polymerase V (UmuC), at 4,299,608 to 4,300,867
GFF4289
GFF4290 - Error-prone repair protein UmuD, at 4,300,875 to 4,301,321
GFF4290
Group
Condition
GFF4286
GFF4287
GFF4288
GFF4289
GFF4290
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
-0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
-0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
-0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
-0.0
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
-0.1
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.0
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.0
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.2
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
+0.3
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.1
+0.1
+0.2
+0.1
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