Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4285 and GFF4286 are separated by 74 nucleotidesGFF4286 and GFF4287 are separated by 34 nucleotidesGFF4287 and GFF4288 are separated by 30 nucleotidesGFF4288 and GFF4289 are separated by 36 nucleotides GFF4285 - Tricarboxylate transport protein TctC, at 205,306 to 206,241 GFF4285 GFF4286 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 206,316 to 207,236 GFF4286 GFF4287 - Acyl-CoA dehydrogenase, at 207,271 to 208,467 GFF4287 GFF4288 - Acyl-CoA dehydrogenase, at 208,498 to 209,664 GFF4288 GFF4289 - Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 209,701 to 210,594 GFF4289
Group Condition GFF4285 GFF4286 GFF4287 GFF4288 GFF4289
complex community Community=arabino-guar; Passage=4 -1.6 N.D. +0.2 -2.9 N.D.
complex community Community=Locust bean gum; Passage=4 -1.2 N.D. -1.5 -0.8 N.D.
complex community Community=Locust bean gum; Passage=4 -2.8 N.D. -1.0 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -2.2 N.D. -1.8 +0.7 N.D.
complex community Community=arabino-guar; Passage=4 -3.0 N.D. -0.3 +0.0 N.D.
complex community Community=Locust bean gum; Passage=4 -1.7 N.D. -1.2 +0.1 N.D.
complex community Community=guar; Passage=4 -2.2 N.D. -0.1 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.9 N.D. -0.0 -0.5 N.D.
complex community Community=guar; Passage=4 -0.2 N.D. -0.4 -0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 N.D. -0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.0 N.D. +0.0 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 N.D. -0.5 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.2 N.D. -0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -1.2 N.D. +0.1 +0.3 N.D.
complex community Community=Kojac gum; Passage=4 -0.8 N.D. +0.4 -0.3 N.D.
phage phage_bap4 -0.7 N.D. -0.1 +0.4 N.D.
phage phage_bap4 -0.7 N.D. +0.1 +0.2 N.D.
complex community Community=Locust bean gum; Passage=1 -0.8 N.D. +0.3 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 N.D. +0.2 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.4 N.D. +0.4 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.9 N.D. +0.3 -1.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.6 N.D. +0.4 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 N.D. -0.7 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 N.D. +0.3 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 N.D. +0.6 +0.1 N.D.
no phage control no phage control +0.2 N.D. -0.0 +0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.9 N.D. -0.0 +0.0 N.D.
complex community Community=guar; Passage=4 +0.8 N.D. +0.5 -0.3 N.D.
phage phage_bap4 +1.0 N.D. +0.4 +0.2 N.D.
complex community Community=guar; Passage=4 +1.7 N.D. +0.1 -0.0 N.D.
remove
GFF4285
plot		 remove
GFF4286
plot		 remove
GFF4287		 remove
GFF4288
plot		 remove
GFF4289
plot