Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21910	PS417_21915	PS417_21920	PS417_21925	PS417_21930
soil	soil sample 3; outgrowth in LB	-0.4	-2.3	-0.1	+0.0	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-2.1	-0.4	+0.1	+0.1
nitrogen source	Adenine (N)	-0.2	-0.5	+0.1	-0.5	-0.8
agar plate interaction control	Taped volatile agar plate with no fungus	-0.0	-1.7	+0.5	-0.1	-0.5
solid stress	Fraxetin 3 mM; solid stress	+0.1	-1.0	-0.2	-0.4	-0.2
seeds	Growth on radish seeds for 72 hours	-0.5	-0.4	+0.2	-0.0	-0.6
phage	P. simiae OR Antrim MOI 10	-0.1	-1.4	-0.0	+0.2	-0.0
phage	P. simiae OR Antrim MOI 10	-0.3	-1.1	+0.1	+0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-1.2	+0.3	+0.0	+0.1
phage	P. simiae OR Antrim MOI 0.1	+0.2	-1.0	+0.2	-0.0	-0.3
phage	P. simiae OR1 MOI 0.1	-0.1	-0.9	-0.3	+0.5	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.9	+0.2	+0.3	-0.2
phage	P. simiae Grant Run MOI 0.1	-0.3	-0.4	+0.4	-0.5	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.3	-0.7	-0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.2	-1.1	+0.3	+0.0	+0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-0.8	-0.3	+0.4	+0.4
nophagecontrol	Only library	-0.4	+0.9	+0.3	-0.2	-0.3
phage	P. simiae Grant Run MOI 10	+0.3	+0.7	-0.2	-0.2	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.1	-0.6	+0.3	+0.4	+0.5
phage	JP1 MOI 1	-0.4	+0.8	-0.3	+0.2	+0.2
seeds	Growth on radish seeds for 72 hours	+0.3	-0.7	+0.8	+0.2	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+1.1	-0.3	+0.3	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6	-0.5	+0.4	+0.4	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	+0.5	+0.2	-0.2	-0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	+1.5	-0.1	-0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0	-0.1	+0.5	+0.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+0.7	+0.4	-0.3	+0.2
phage	JP1 MOI 10	-0.5	+1.8	-0.0	+0.0	+0.1
carbon source	L-Valine (C)	-0.0	+1.2	+0.5	+0.3	+0.0
carbon source	L-Valine (C)	+0.6	+0.3	+0.5	+0.3	+0.5