Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_21905	PS417_21910	PS417_21915	PS417_21920	PS417_21925
soil	soil sample 3; outgrowth in LB	+0.1	-0.4	-2.3	-0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.3	-2.1	-0.4	+0.1
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	-0.0	-1.7	+0.5	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.3	-1.2	+0.3	+0.0
phage	P. simiae OR1 MOI 0.1	-0.6	-0.1	-0.9	-0.3	+0.5
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6	-0.1	-0.6	-0.1	+0.2
solid stress	Fraxetin 3 mM; solid stress	+0.2	+0.1	-1.0	-0.2	-0.4
phage	P. simiae Grant Run MOI 0.1	-0.2	-0.3	-0.4	+0.4	-0.5
soil	soil sample 5; outgrowth in LB	-0.5	+0.5	-0.5	+0.0	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	+0.2	-1.1	+0.3	+0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.0	-0.8	-0.3	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.1	-0.6	+0.0	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.3	+0.3	-0.7	-0.1
seeds	Growth on radish seeds for 24 hours	-0.4	-0.3	-0.3	+0.4	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7	-0.3	-0.6	-0.2	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.2	-0.1	-0.6	+0.3	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	+0.6	-0.5	+0.4	+0.4
nophagecontrol	Only library	+0.1	-0.4	+0.9	+0.3	-0.2
seeds	Growth on radish seeds for 72 hours	+0.1	+0.3	-0.7	+0.8	+0.2
phage	JP1 MOI 1	+0.3	-0.4	+0.8	-0.3	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.6	+1.1	-0.3	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.4	+0.7	+0.4	-0.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.0	+1.5	-0.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7	+0.5	+0.2	+0.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+1.0	-0.1	+0.5	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	+0.7	+0.5	+0.2	-0.2
carbon source	L-Valine (C)	-0.3	+0.6	+0.3	+0.5	+0.3
phage	JP1 MOI 10	+0.1	-0.5	+1.8	-0.0	+0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0	-0.0	+0.2	-0.0	+0.4
carbon source	L-Valine (C)	-0.3	-0.0	+1.2	+0.5	+0.3