Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_21735 and PS417_21740 overlap by 4 nucleotidesPS417_21740 and PS417_21745 are separated by 91 nucleotidesPS417_21745 and PS417_21750 are separated by 695 nucleotidesPS417_21750 and PS417_21755 are separated by 396 nucleotides PS417_21735: PS417_21735 - ABC transporter for L-Arginine, permease component 2 (from data), at 4,720,114 to 4,720,812 _21735 PS417_21740: PS417_21740 - ABC transporter for L-Arginine, permease component 1 (from data), at 4,720,809 to 4,721,498 _21740 PS417_21745: PS417_21745 - ABC transporter for L-Arginine, substrate-binding component (from data), at 4,721,590 to 4,722,375 _21745 PS417_21750: PS417_21750 - acetyl-CoA synthetase, at 4,723,071 to 4,725,026 _21750 PS417_21755: PS417_21755 - hypothetical protein, at 4,725,423 to 4,725,692 _21755
Group Condition PS417_21735 PS417_21740 PS417_21745 PS417_21750 PS417_21755
carbon source L-Arginine (C) -2.8 -3.5 -3.7 -1.3 +0.2
carbon source L-Arginine (C) -2.4 -3.4 -3.8 -1.1 +0.1
carbon source Carbon source L-Ornithine 5 mM -0.9 -0.9 -0.6 -1.4 -0.0
carbon source L-Valine (C) +0.2 +0.7 +0.0 -4.7 -0.1
carbon source Carbon source L-Ornithine 10 mM -0.8 -0.9 -1.0 -1.1 +0.0
carbon source Carbon source L-Ornithine 5 mM -0.7 -0.8 -0.9 -1.3 -0.2
carbon source Ethanol (C) +0.1 -0.0 +0.1 -3.9 +0.1
carbon source NAG (C) +0.0 +0.3 -0.1 -3.3 -0.4
carbon source Gly-Glu (C) +0.5 +0.4 -0.3 -4.2 +0.2
carbon source Carbon source L-Ornithine 10 mM -0.9 -0.8 -0.7 -0.9 -0.0
carbon source NAG (C) +0.1 +0.1 -0.1 -3.4 +0.0
carbon source Ethanol (C) +0.2 +0.2 +0.0 -4.0 +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -0.4 -0.9 -0.8 -0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -0.9 -0.4 -0.7 -0.3
carbon source Gly-Glu (C) +0.7 +0.6 -0.4 -3.8 +0.2
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.5 -0.7 -0.3 -1.3 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -0.9 -1.0 -0.1 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -0.9 -0.5 -0.8 +0.2
carbon source L-Citrulline (C) -0.3 -0.2 -0.3 -1.9 +0.2
carbon source L-Citrulline (C) -0.4 -0.1 -0.3 -1.8 +0.3
carbon source L-Valine (C) +0.4 +0.9 +0.3 -4.3 +0.5
carbon source L-Leucine (C) +0.1 +0.0 +0.2 -2.7 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.8 -0.4 -0.8 +0.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -0.8 -0.9 +0.1 +0.4
carbon source L-Leucine (C) +0.2 +0.2 +0.1 -2.6 -0.0
carbon source Fumarate (C) +0.2 +0.2 +0.3 -2.0 +0.0
carbon source Fumarate (C) +0.2 +0.3 +0.0 -2.1 +0.2
carbon source L-Histidine (C) +0.2 +0.4 +0.2 -1.9 +0.1
carbon source octanoate (C) +0.5 +0.8 +0.7 -3.6 +0.9
carbon source octanoate (C) +0.8 +1.1 +0.6 -3.4 +0.8
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