Fitness for 5 genes in Pseudomonas simiae WCS417

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

500 ntPS417_21700 and PS417_21705 are separated by 51 nucleotidesPS417_21705 and PS417_21710 are separated by 245 nucleotidesPS417_21710 and PS417_21715 are separated by 309 nucleotidesPS417_21715 and PS417_21720 are separated by 14 nucleotides PS417_21700: PS417_21700 - arginine N-succinyltransferase, at 4,707,176 to 4,708,201 _21700 PS417_21705: PS417_21705 - arginine N-succinyltransferase, at 4,708,253 to 4,709,272 _21705 PS417_21710: PS417_21710 - Succinylornithine transaminase (EC 2.6.1.81) (from data), at 4,709,518 to 4,710,738 _21710 PS417_21715: PS417_21715 - hypothetical protein, at 4,711,048 to 4,716,966 _21715 PS417_21720: PS417_21720 - AraC family transcriptional regulator, at 4,716,981 to 4,717,961 _21720
Group Condition PS417_21700 PS417_21705 PS417_21710 PS417_21715 PS417_21720
carbon source L-Arginine (C) -5.5 -2.4 -3.6 -0.3 N.D.
carbon source L-Arginine (C) -4.0 -2.6 -4.1 -0.3 N.D.
carbon source L-Alanine (C) -2.3 -4.7 +0.2 +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.6 -2.5 -0.3 N.D.
carbon source D,L-Lactate (C) -2.3 -2.7 +0.0 -0.0 N.D.
carbon source octanoate (C) -1.9 -3.1 +0.1 +0.1 N.D.
carbon source D-Alanine (C) -2.9 -2.1 +0.2 +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -3.2 +0.2 +0.0 N.D.
carbon source octanoate (C) -1.7 -3.3 +0.2 +0.2 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -2.7 +0.4 -0.0 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -1.8 +0.1 +0.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -2.5 +0.3 +0.0 N.D.
carbon source D-Trehalose (C) -2.1 -2.3 +0.3 -0.1 N.D.
carbon source L-Alanine (C) -2.8 -2.2 +0.8 +0.1 N.D.
carbon source D-Trehalose (C) -1.8 -2.3 -0.0 -0.0 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -2.1 -0.3 +0.2 N.D.
carbon source L-Valine (C) -2.5 -2.3 +0.5 +0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.3 -2.8 +0.2 +0.1 N.D.
carbon source D-Glucose (C) -1.5 -2.4 +0.1 +0.1 N.D.
carbon source D-Galacturonic Acid (C) -1.7 -2.1 +0.2 -0.1 N.D.
carbon source L-Valine (C) -2.4 -1.9 +0.4 +0.4 N.D.
nitrogen source Glycine (N) -1.7 -2.3 +0.4 +0.2 N.D.
carbon source D-Lactate (C) -1.7 -2.0 +0.5 +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -3.2 +0.6 +0.2 N.D.
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 -3.5 -0.7 +0.1 N.D.
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 -2.7 +0.5 +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.2 +0.1 -0.2 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.2 +3.1 +0.1 -0.1 N.D.
carbon source Gly-Glu (C) +4.5 +4.2 -1.0 -0.8 N.D.
carbon source Gly-Glu (C) +5.4 +4.8 -0.7 -0.9 N.D.
remove
PS417_21700
plot		 remove
PS417_21705
plot		 remove
PS417_21710		 remove
PS417_21715
plot		 remove
PS417_21720
plot