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Fitness for 5 genes in
Pseudomonas simiae WCS417
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500 nt
PS417_21570 and PS417_21575 are separated by 307 nucleotides
PS417_21575 and PS417_21580 are separated by 44 nucleotides
PS417_21580 and PS417_21585 are separated by 92 nucleotides
PS417_21585 and PS417_21590 are separated by 141 nucleotides
PS417_21570: PS417_21570 - flagellar basal body rod protein FlgB, at 4,683,861 to 4,684,268
_21570
PS417_21575: PS417_21575 - chemotaxis protein, at 4,684,576 to 4,685,403
_21575
PS417_21580: PS417_21580 - chemotaxis protein CheW, at 4,685,448 to 4,686,380
_21580
PS417_21585: PS417_21585 - flagellar basal body P-ring biosynthesis protein FlgA, at 4,686,473 to 4,687,237
_21585
PS417_21590: PS417_21590 - flagellar biosynthesis anti-sigma factor FlgM, at 4,687,379 to 4,687,702
_21590
Group
Condition
PS417
_21570
PS417
_21575
PS417
_21580
PS417
_21585
PS417
_21590
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.4
-8.3
-0.8
-8.7
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.3
-5.3
-2.3
-9.0
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.2
-8.0
-0.6
-7.4
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.0
-6.2
-0.7
-9.2
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.3
-8.1
+0.3
-6.8
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-9.3
-8.2
-1.0
-7.3
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-10.0
-5.7
-1.2
-8.2
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.3
-5.9
-0.3
-7.3
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-7.1
-8.1
-2.6
-7.0
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-8.2
-4.4
-1.2
-9.3
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-7.9
-6.3
-0.5
-8.4
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-11.1
-4.3
+0.7
-8.5
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-9.8
-4.8
-0.4
-8.0
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-7.4
-8.0
-0.4
-6.8
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-9.9
-5.1
-1.0
-6.7
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-6.7
-8.1
-0.2
-7.4
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-8.0
-5.6
-1.0
-7.8
N.D.
motility
outer cut, LB soft agar motility assay
-8.2
-4.6
-1.1
-5.9
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-6.5
-5.1
-1.6
-6.6
N.D.
motility
outer cut, LB soft agar motility assay
-8.1
-4.3
-0.9
-4.9
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-5.1
-7.2
-0.1
-5.6
N.D.
motility
outer cut, LB soft agar motility assay
-6.7
-4.1
-1.1
-5.7
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-5.4
-6.8
-0.1
-5.3
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-4.4
-4.2
-0.6
-5.4
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-4.5
-3.7
-0.1
-6.2
N.D.
motility
inner cut, LB soft agar motility assay
-4.0
-3.9
-1.0
-5.4
N.D.
motility
inner cut, LB soft agar motility assay
-4.8
-4.6
-0.8
-3.8
N.D.
motility
outer cut, LB soft agar motility assay
-3.4
-3.0
-0.7
-5.7
N.D.
motility_chemotaxis
Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
-5.2
-3.2
-0.1
-4.1
N.D.
motility
inner cut, LB soft agar motility assay
-4.0
-3.0
-1.0
-4.3
N.D.
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