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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4205 and GFF4206 are separated by 162 nucleotides
GFF4206 and GFF4207 are separated by 489 nucleotides
GFF4207 and GFF4208 are separated by 176 nucleotides
GFF4208 and GFF4209 overlap by 19 nucleotides
GFF4205 - Ubiquinol-cytochrome C chaperone, at 4,227,724 to 4,228,251
GFF4205
GFF4206 - Outer membrane beta-barrel assembly protein BamE, at 4,228,414 to 4,228,926
GFF4206
GFF4207 - Hypothetical Nudix-like regulator, at 4,229,416 to 4,230,060
GFF4207
GFF4208 - Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13), at 4,230,237 to 4,230,455
GFF4208
GFF4209 - Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13), at 4,230,437 to 4,231,120
GFF4209
Group
Condition
GFF4205
GFF4206
GFF4207
GFF4208
GFF4209
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-1.3
-0.0
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.3
-0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.4
+0.0
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.3
+0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.1
+0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.7
+0.3
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
+0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.1
+0.1
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
+0.0
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.3
+0.0
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
-0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.3
-0.0
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.3
-0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.2
+0.2
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.2
+0.2
+0.1
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