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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4195 and GFF4196 overlap by 32 nucleotides
GFF4196 and GFF4197 are separated by 91 nucleotides
GFF4197 and GFF4198 are separated by 4 nucleotides
GFF4198 and GFF4199 are separated by 46 nucleotides
GFF4195 - ATP-grasp enzyme-like protein, at 4,218,475 to 4,219,683
GFF4195
GFF4196 - hypothetical protein, at 4,219,652 to 4,220,203
GFF4196
GFF4197 - Transcriptional regulator, LacI family, at 4,220,295 to 4,221,329
GFF4197
GFF4198 - Uronate isomerase (EC 5.3.1.12), at 4,221,334 to 4,222,743
GFF4198
GFF4199 - Altronate dehydratase (EC 4.2.1.7), at 4,222,790 to 4,224,319
GFF4199
Group
Condition
GFF4195
GFF4196
GFF4197
GFF4198
GFF4199
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.2
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.2
+0.0
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
+0.0
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
+0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
+0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.3
+0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
+0.4
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.1
+0.4
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.2
+0.4
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
+0.4
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.4
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.2
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.4
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.4
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.4
-0.0
+0.0
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