Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4181 and GFF4182 are separated by 2 nucleotidesGFF4182 and GFF4183 are separated by 115 nucleotidesGFF4183 and GFF4184 are separated by 204 nucleotidesGFF4184 and GFF4185 are separated by 125 nucleotides GFF4181 - hypothetical protein, at 86,694 to 87,257 GFF4181 GFF4182 - Extracytoplasmic function (ECF) sigma factor VreI, at 87,260 to 87,775 GFF4182 GFF4183 - hypothetical protein, at 87,891 to 88,889 GFF4183 GFF4184 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 89,094 to 102,362 GFF4184 GFF4185 - RNA polymerase ECF-type sigma factor, at 102,488 to 103,123 GFF4185
Group Condition GFF4181 GFF4182 GFF4183 GFF4184 GFF4185
complex community Community=arabino-guar; Passage=4 -0.7 -1.8 +0.2 +0.2 +0.2
phage phage_bap4 -0.2 -1.2 -0.1 +0.1 +0.1
phage phage_bap4 -0.6 -0.7 -0.1 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -1.0 -0.4 +0.1 +0.1
complex community Community=guar; Passage=4 -0.2 -0.3 -1.5 +0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.8 +0.0 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.7 -0.4 +0.4 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 +0.3 -0.4 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.4 +0.1 -0.1 +0.0
phage phage_bap4 -0.3 -0.6 -0.2 +0.0 +0.3
complex community Community=Kojac gum; Passage=4 -2.3 +1.4 -0.3 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.4 -0.2 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.2 -0.1 +0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.8 +0.3 +0.0 -0.0
complex community Community=arabino-guar; Passage=4 -0.1 -1.1 +0.1 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 +0.1 +0.3 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.7 -0.4 -0.0 -0.5
phage phage_bap4 -0.5 +0.1 +0.2 -0.1 +0.2
complex community Community=guar; Passage=4 -0.1 +0.7 -1.2 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.4 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 +0.1 +0.4 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 +0.6 +0.2 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.6 +0.3 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.7 -0.2 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.5 +0.1 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 +1.1 -0.1 +0.2 -0.8
complex community Community=arabino-guar; Passage=4 +0.8 +0.2 +0.3 +0.2 -0.3
complex community Community=guar; Passage=4 -0.0 +0.7 +0.5 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.5 +0.3 -0.1 +0.6
complex community Community=Locust bean gum; Passage=4 +1.4 +0.1 +0.3 +0.1 -0.0
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