Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4179 and GFF4180 are separated by 192 nucleotidesGFF4180 and GFF4181 are separated by 469 nucleotidesGFF4181 and GFF4182 are separated by 2 nucleotidesGFF4182 and GFF4183 are separated by 115 nucleotides GFF4179 - hypothetical protein, at 83,087 to 83,692 GFF4179 GFF4180 - hypothetical protein, at 83,885 to 86,224 GFF4180 GFF4181 - hypothetical protein, at 86,694 to 87,257 GFF4181 GFF4182 - Extracytoplasmic function (ECF) sigma factor VreI, at 87,260 to 87,775 GFF4182 GFF4183 - hypothetical protein, at 87,891 to 88,889 GFF4183
Group Condition GFF4179 GFF4180 GFF4181 GFF4182 GFF4183
complex community Community=arabino-guar; Passage=4 -0.4 -0.3 -0.7 -1.8 +0.2
complex community Community=Kojac gum; Passage=4 -0.4 -0.6 -2.3 +1.4 -0.3
complex community Community=guar; Passage=4 +0.1 -0.2 -0.2 -0.3 -1.5
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 -0.0 -1.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.4 -0.8 +0.0
phage phage_bap4 +0.0 +0.0 -0.2 -1.2 -0.1
phage phage_bap4 -0.0 -0.0 -0.6 -0.7 -0.1
phage phage_bap4 +0.0 -0.0 -0.3 -0.6 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.0 -0.6 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 -0.1 -1.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.0 -0.7 -0.4 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 -0.1 -0.8 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 -0.7 +0.3 -0.4
complex community Community=Locust bean gum; Passage=4 -0.3 +0.4 +0.1 -0.2 -0.4
complex community Community=guar; Passage=4 -0.4 +0.6 -0.1 +0.7 -1.2
complex community Community=guar; Passage=4 -0.4 -0.2 -0.2 +0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.2 -0.5 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.2 -0.1 +0.7 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 -0.5 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.1 -0.5 +0.1 +0.3
no phage control no phage control +0.2 +0.0 -0.1 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 -0.7 +0.6 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 -0.2 +0.7 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.7 +0.6 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 +0.5 -0.2 -0.1
complex community Community=guar; Passage=4 -0.4 +0.1 -0.0 +0.7 +0.5
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 +0.8 +0.2 +0.3
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.5 +0.5 +0.3
complex community Community=Locust bean gum; Passage=4 +0.4 +0.0 +0.3 +1.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 +1.4 +0.1 +0.3
remove
GFF4179
plot
remove
GFF4180
plot
remove
GFF4181
remove
GFF4182
plot
remove
GFF4183
plot