Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4178 and GFF4179 are separated by 15 nucleotidesGFF4179 and GFF4180 overlap by 4 nucleotidesGFF4180 and GFF4181 are separated by 11 nucleotidesGFF4181 and GFF4182 overlap by 4 nucleotides GFF4178 - Conjugative transfer protein TrbD, at 1,094,330 to 1,094,602 GFF4178 GFF4179 - Conjugative transfer protein TrbE, at 1,094,618 to 1,097,071 GFF4179 GFF4180 - Conjugative transfer protein TrbJ, at 1,097,068 to 1,097,793 GFF4180 GFF4181 - FIG00961917: hypothetical protein, at 1,097,805 to 1,098,146 GFF4181 GFF4182 - Conjugative transfer protein TrbL, at 1,098,143 to 1,099,519 GFF4182
Group Condition GFF4178 GFF4179 GFF4180 GFF4181 GFF4182
carbon source Ying_all64 rep A; time point 2 N.D. -0.1 -0.2 -0.8 -0.1
carbon source Ying_all64 rep A; time point 3 N.D. -0.0 -0.5 -0.3 -0.0
carbon source Ying_sugar7 rep C; time point 1 N.D. -0.0 +0.4 -0.8 -0.2
carbon source Ying_AminoAcid20 rep A; time point 1 N.D. +0.1 +0.0 -0.5 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.1 -0.1 -0.5 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.0 +0.6 -0.9 +0.1
carbon source Ying_sugar7 rep B; time point 1 N.D. +0.1 +0.3 -0.3 -0.3
carbon source Ying_sugar7 rep A; time point 2 N.D. +0.1 +0.7 -0.7 -0.0
carbon source Ying_all64 rep B; time point 2 N.D. -0.1 +0.5 -0.4 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. +0.1 +1.0 -0.7 -0.2
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. +0.0 +0.6 -0.2 -0.1
carbon source Ying_Others16 rep B; time point 2 N.D. +0.1 +0.6 -0.2 -0.1
carbon source Ying_all64 rep B; time point 3 N.D. -0.1 +0.6 -0.1 +0.0
carbon source Ying_sugar7 rep B; time point 3 N.D. -0.1 +0.7 -0.2 +0.1
carbon source Ying_Others16 rep B; time point 3 N.D. -0.1 +0.6 +0.1 -0.2
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. +0.0 +0.5 +0.0 -0.2
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. -0.1 +0.7 +0.2 -0.2
carbon source Ying_Others16 rep C; time point 2 N.D. +0.1 +0.5 +0.2 -0.2
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. -0.1 +0.3 +0.5 -0.0
carbon source Ying_Others16 rep B; time point 1 N.D. -0.0 +1.1 -0.5 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. -0.0 +1.0 -0.3 +0.1
carbon source Ying_all64 rep C; time point 1 N.D. -0.2 +0.8 +0.0 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. -0.3 +0.6 +0.2 +0.2
carbon source Ying_sugar7 rep A; time point 1 N.D. -0.0 +0.8 +0.1 -0.2
carbon source Ying_Others16 rep A; time point 2 N.D. +0.1 +0.5 +0.2 -0.1
carbon source Ying_Others16 rep C; time point 3 N.D. -0.0 +1.0 +0.0 -0.1
carbon source Ying_sugar7 rep C; time point 3 N.D. -0.1 +0.6 +0.3 +0.1
carbon source Ying_all64 rep C; time point 2 N.D. +0.1 +1.3 +0.0 -0.3
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. +0.2 +0.7 +0.5 -0.1
carbon source Ying_all64 rep C; time point 3 N.D. -0.2 +1.7 +0.2 -0.2
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