Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4165 and GFF4166 overlap by 11 nucleotidesGFF4166 and GFF4167 overlap by 4 nucleotidesGFF4167 and GFF4168 are separated by 1 nucleotidesGFF4168 and GFF4169 overlap by 4 nucleotides GFF4165 - Deoxyribose-phosphate aldolase (EC 4.1.2.4), at 70,247 to 71,041 GFF4165 GFF4166 - Cytidine deaminase (EC 3.5.4.5), at 71,031 to 71,501 GFF4166 GFF4167 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 71,498 to 73,120 GFF4167 GFF4168 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 73,122 to 73,937 GFF4168 GFF4169 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 73,934 to 74,878 GFF4169
Group Condition GFF4165 GFF4166 GFF4167 GFF4168 GFF4169
complex community Community=guar; Passage=4 N.D. -1.1 -1.1 -0.6 -0.2
complex community Community=guar; Passage=4 N.D. -2.4 -0.1 -0.3 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.5 -1.2 +0.1
phage phage_bap4 N.D. +0.0 -0.8 -0.4 -0.1
complex community Community=Kojac gum; Passage=4 N.D. -1.3 -0.3 +1.0 -0.3
complex community Community=guar; Passage=4 N.D. +0.3 -1.5 +0.5 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.1 -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 +0.3 -1.2 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -1.0 -0.2 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 +0.0 +0.2 -0.7
phage phage_bap4 N.D. -0.5 -0.0 +0.3 -0.3
phage phage_bap4 N.D. -0.5 -0.3 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.4 -0.9 -0.1
complex community Community=Kojac gum; Passage=1 N.D. +0.5 -0.7 -0.1 +0.2
phage phage_bap4 N.D. -0.5 +0.5 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.5 -0.5 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.3 -1.2 +0.7 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 +0.4 -0.3 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.7 +0.4 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.7 +0.3 -0.0
complex community Community=guar; Passage=4 N.D. +1.1 -0.8 -0.2 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.8 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.6 +0.6 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.5 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 +0.6 +0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 +0.5 +0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.3 +0.4 +0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.5 +0.5 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.4 +0.7 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +1.3 -0.1 +0.6 +0.7
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