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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4160 and GFF4161 are separated by 39 nucleotides
GFF4161 and GFF4162 are separated by 103 nucleotides
GFF4162 and GFF4163 are separated by 175 nucleotides
GFF4163 and GFF4164 overlap by 8 nucleotides
GFF4160 - Ankyrin, at 4,183,899 to 4,184,537
GFF4160
GFF4161 - hypothetical protein, at 4,184,577 to 4,185,083
GFF4161
GFF4162 - Cell wall hydrolyses involved in spore germination, at 4,185,187 to 4,185,858
GFF4162
GFF4163 - hypothetical protein, at 4,186,034 to 4,186,384
GFF4163
GFF4164 - Uncharacterized protein, possibly involved in aromatic compounds catabolism, at 4,186,377 to 4,186,847
GFF4164
Group
Condition
GFF4160
GFF4161
GFF4162
GFF4163
GFF4164
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.5
+0.3
-0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.3
-0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.5
+0.3
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.0
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.3
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.3
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.5
+0.3
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.3
-0.0
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.1
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
+0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.2
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.3
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.4
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.3
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.4
+0.3
+0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.0
+0.2
+0.3
N.D.
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