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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4157 and GFF4158 overlap by 44 nucleotides
GFF4158 and GFF4159 are separated by 3 nucleotides
GFF4159 and GFF4160 are separated by 59 nucleotides
GFF4160 and GFF4161 are separated by 39 nucleotides
GFF4157 - Zinc metalloprotease, at 4,182,081 to 4,182,815
GFF4157
GFF4158 - UPF0260 protein YcgN, at 4,182,772 to 4,183,197
GFF4158
GFF4159 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center, at 4,183,201 to 4,183,839
GFF4159
GFF4160 - Ankyrin, at 4,183,899 to 4,184,537
GFF4160
GFF4161 - hypothetical protein, at 4,184,577 to 4,185,083
GFF4161
Group
Condition
GFF4157
GFF4158
GFF4159
GFF4160
GFF4161
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.2
-0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.2
+0.2
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
+0.2
+0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
+0.3
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.0
-0.0
+0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.0
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
+0.1
+0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
+0.1
-0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
+0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.3
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
+0.0
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.1
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.0
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
-0.1
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
+0.0
-0.1
+0.2
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