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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4150 and GFF4151 are separated by 96 nucleotides
GFF4151 and GFF4152 are separated by 23 nucleotides
GFF4152 and GFF4153 overlap by 23 nucleotides
GFF4153 and GFF4154 are separated by 187 nucleotides
GFF4150 - 4-carboxymuconolactone decarboxylase (EC 4.1.1.44), at 4,175,577 to 4,175,900
GFF4150
GFF4151 - Thiazole tautomerase TenI (EC 5.3.99.10), at 4,175,997 to 4,176,551
GFF4151
GFF4152 - Pyridoxal phosphate-containing protein YggS, at 4,176,575 to 4,177,309
GFF4152
GFF4153 - TonB-dependent receptor, at 4,177,287 to 4,180,085
GFF4153
GFF4154 - hypothetical protein, at 4,180,273 to 4,180,932
GFF4154
Group
Condition
GFF4150
GFF4151
GFF4152
GFF4153
GFF4154
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.6
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.4
-0.3
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
+0.2
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.4
-0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.4
+0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
-0.3
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.3
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
+0.0
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.4
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.5
+0.1
-0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.2
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.5
+0.0
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.3
-0.2
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
-0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.3
+0.2
-0.2
+0.2
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