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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4147 and GFF4148 are separated by 147 nucleotides
GFF4148 and GFF4149 are separated by 91 nucleotides
GFF4149 and GFF4150 are separated by 295 nucleotides
GFF4150 and GFF4151 are separated by 68 nucleotides
GFF4147 - hypothetical protein, at 53,656 to 53,946
GFF4147
GFF4148 - hypothetical protein, at 54,094 to 55,098
GFF4148
GFF4149 - hypothetical protein, at 55,190 to 56,152
GFF4149
GFF4150 - Salicylate hydroxylase (EC 1.14.13.1), at 56,448 to 57,704
GFF4150
GFF4151 - RidA/YER057c/UK114 superfamily, group 1, at 57,773 to 58,405
GFF4151
Group
Condition
GFF4147
GFF4148
GFF4149
GFF4150
GFF4151
vitamin
M9 with calcium pantothenate 10 mg/mL
-1.0
-0.0
-1.0
+0.1
-0.1
complex community
Community=arabino-guar; Passage=4
+0.5
+0.4
-0.9
-0.8
-0.5
complex community
Community=Locust bean gum; Passage=4
+1.2
-0.3
-1.9
-0.4
+0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.7
+0.0
-0.2
-0.3
-0.0
no phage control
no phage control
-0.2
-0.2
-0.7
+0.2
+0.2
complex community
Community=arabino-guar; Passage=4
+0.1
-0.2
-1.4
+0.4
+0.4
complex community
Community=arabino-guar; Passage=4
-0.6
-0.4
+0.6
-0.9
+0.7
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.0
-0.4
+0.6
-0.5
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.1
-0.7
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.1
+0.4
-0.6
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.5
+0.1
+0.5
-0.6
+0.1
complex community
Community=guar; Passage=4
-1.7
+0.4
+1.3
-0.5
+0.1
phage
phage_bap4
-0.3
+0.3
+0.1
+0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.7
+0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.1
+0.4
-0.6
+0.3
phage
phage_bap4
+0.4
+0.0
-0.5
+0.1
+0.2
complex community
Community=guar; Passage=4
+0.8
-0.6
-1.1
+0.7
+0.4
complex community
Community=arabino-guar; Passage=4
-0.9
+0.1
-0.1
+1.2
-0.0
no phage control
no phage control
+0.5
+0.3
-0.3
-0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
+0.0
+0.7
-0.3
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.2
+0.5
-0.2
+0.2
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.6
+0.4
+0.7
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
-0.1
+0.5
-0.2
+0.0
complex community
Community=guar; Passage=4
+1.2
+0.2
+0.2
+0.3
-0.7
vitamin
M9 with Supernatant from Cyptococcus
+0.3
+0.3
+0.5
+0.2
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
+0.1
+0.7
+0.2
+0.3
complex community
Community=guar; Passage=4
-0.1
-0.2
+1.1
+0.1
+0.4
complex community
Community=Kojac gum; Passage=4
+0.7
+0.1
+0.6
+0.4
-0.4
complex community
Community=Locust bean gum; Passage=4
+0.8
-0.1
-0.2
+0.2
+1.1
complex community
Community=Locust bean gum; Passage=4
+0.8
+0.2
+1.0
+0.0
+0.6
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