Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF412 and GFF413 overlap by 4 nucleotidesGFF413 and GFF414 are separated by 72 nucleotidesGFF414 and GFF415 are separated by 10 nucleotidesGFF415 and GFF416 are separated by 69 nucleotides GFF412 - Transcription-repair coupling factor, at 445,906 to 449,388 GFF412 GFF413 - Phosphoserine phosphatase (EC 3.1.3.3), at 449,385 to 450,098 GFF413 GFF414 - Malate dehydrogenase (EC 1.1.1.37), at 450,171 to 451,241 GFF414 GFF415 - hypothetical protein, at 451,252 to 451,581 GFF415 GFF416 - hypothetical protein, at 451,651 to 451,878 GFF416
Group Condition GFF412 GFF413 GFF414 GFF415 GFF416
complex community Community=guar; Passage=4 -0.1 N.D. -0.4 -0.3 N.D.
complex community Community=guar; Passage=4 -0.1 N.D. -0.3 +0.1 N.D.
complex community Community=Kojac gum; Passage=4 -0.5 N.D. -0.2 +0.4 N.D.
complex community Community=guar; Passage=4 -0.1 N.D. -0.2 +0.0 N.D.
phage phage_bap4 +0.0 N.D. -0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. -0.0 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. -0.4 +0.0 N.D.
phage phage_bap4 +0.1 N.D. -0.3 +0.1 N.D.
phage phage_bap4 +0.1 N.D. -0.1 -0.0 N.D.
phage phage_bap4 +0.1 N.D. -0.2 +0.0 N.D.
phage phage_bap4 +0.4 N.D. -0.3 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. -0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. +0.0 -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.2 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. +0.0 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.1 -0.1 N.D.
no phage control no phage control +0.1 N.D. -0.2 +0.1 N.D.
phage phage_bap4 +0.4 N.D. -0.2 -0.1 N.D.
phage phage_bap4 +0.4 N.D. -0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. +0.2 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. +0.1 -0.1 N.D.
phage phage_bap4 +0.4 N.D. -0.1 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 N.D. +0.2 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. +0.1 -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.3 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 N.D. +0.1 -0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 N.D. +0.2 +0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 N.D. +0.2 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.4 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 N.D. +0.5 +0.1 N.D.
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