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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4136 and GFF4137 overlap by 1 nucleotides
GFF4137 and GFF4138 are separated by 147 nucleotides
GFF4138 and GFF4139 are separated by 39 nucleotides
GFF4139 and GFF4140 are separated by 116 nucleotides
GFF4136 - Dienelactone hydrolase family protein, at 4,160,488 to 4,161,189
GFF4136
GFF4137 - Quinone oxidoreductase (EC 1.6.5.5), at 4,161,189 to 4,162,160
GFF4137
GFF4138 - hypothetical protein, at 4,162,308 to 4,163,330
GFF4138
GFF4139 - Putative transmembrane protein, at 4,163,370 to 4,164,089
GFF4139
GFF4140 - Transcription termination factor Rho, at 4,164,206 to 4,165,462
GFF4140
Group
Condition
GFF4136
GFF4137
GFF4138
GFF4139
GFF4140
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.0
-0.1
-0.8
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
+0.2
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.1
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.1
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.0
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
-0.1
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
-0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
-0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
+0.2
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.1
+0.2
+0.2
N.D.
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