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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4132 and GFF4133 are separated by 89 nucleotides
GFF4133 and GFF4134 are separated by 0 nucleotides
GFF4134 and GFF4135 are separated by 43 nucleotides
GFF4135 and GFF4136 overlap by 2 nucleotides
GFF4132 - tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmG, at 4,156,839 to 4,158,689
GFF4132
GFF4133 - tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE, at 4,158,779 to 4,160,065
GFF4133
GFF4134 - hypothetical protein, at 4,160,066 to 4,160,323
GFF4134
GFF4135 - hypothetical protein, at 4,160,367 to 4,160,489
GFF4135
GFF4136 - Dienelactone hydrolase family protein, at 4,160,488 to 4,161,189
GFF4136
Group
Condition
GFF4132
GFF4133
GFF4134
GFF4135
GFF4136
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.3
+0.3
-1.9
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.8
-0.2
-0.5
-0.8
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.6
-0.6
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.7
-0.5
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
-0.6
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.4
-0.5
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
+0.1
-0.5
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.3
-0.1
-0.9
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.6
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.1
-0.5
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.3
-0.3
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
-0.6
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
-0.1
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.8
+0.1
+0.0
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.2
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
-0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
-0.3
+0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.0
+0.0
+0.1
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