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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4129 and GFF4130 are separated by 1116 nucleotides
GFF4130 and GFF4131 are separated by 222 nucleotides
GFF4131 and GFF4132 are separated by 129 nucleotides
GFF4132 and GFF4133 overlap by 4 nucleotides
GFF4129 - FIG01046935: hypothetical protein, at 9,875 to 10,750
GFF4129
GFF4130 - putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component, at 11,867 to 13,546
GFF4130
GFF4131 - PTS system, glucose-specific IIC component (EC 2.7.1.69) / PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIA component (EC 2.7.1.69), at 13,769 to 15,310
GFF4131
GFF4132 - Glucose-6-phosphate isomerase (EC 5.3.1.9), at 15,440 to 16,282
GFF4132
GFF4133 - 6-phospho-3-hexuloisomerase, at 16,279 to 16,845
GFF4133
Group
Condition
GFF4129
GFF4130
GFF4131
GFF4132
GFF4133
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.1
-0.3
-0.0
-0.1
-1.0
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.3
+0.0
-0.1
-0.1
-0.6
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.1
-0.5
-0.3
+0.0
-0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+1.2
-0.4
-0.5
-0.4
-0.9
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-0.0
-0.2
-0.2
+0.3
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-0.2
-0.1
+0.2
-0.1
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
+0.0
-0.2
-0.1
+0.2
-0.3
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.3
+0.0
+0.1
-0.2
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.0
-0.2
-0.2
-0.3
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.1
-0.3
-0.3
+0.0
+0.3
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.5
-0.1
-0.0
+0.1
+0.4
phage
phi19h1_phage 15 MOI
-0.0
+0.0
+0.0
+0.4
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-0.3
+0.0
+0.1
-0.2
+0.3
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
+0.1
-0.1
-0.2
+0.4
-0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.3
-0.3
+0.5
+0.2
-0.5
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
-0.2
-0.1
+0.2
-0.1
+0.4
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.2
+0.0
-0.1
+0.1
+0.6
nophagecontrol
No phage control
-0.2
+0.0
+0.1
+0.1
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.4
-0.0
-0.1
-0.2
+0.5
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.0
-0.1
+0.2
+0.1
+0.4
phage
6H2_phage 10 MOI; agar plate assay
+0.2
-0.4
+0.2
+0.1
+0.4
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.4
-0.1
+0.1
+0.1
+0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.0
+0.3
-0.2
-0.0
+0.7
phage
Ffm_phage 10 MOI; agar plate assay
-0.1
-0.2
+0.1
+0.0
+0.9
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.3
-0.2
-0.1
+0.1
+0.6
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.0
-0.1
+0.2
-0.0
+0.7
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.0
-0.1
+0.1
+0.1
+0.7
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.1
+0.0
+0.1
+0.0
+0.7
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.4
-0.1
+0.1
+0.1
+0.8
phage
6F2_phage 15 MOI
-0.1
+0.1
+0.4
+0.1
+0.9
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