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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4120 and GFF4121 overlap by 1 nucleotides
GFF4121 and GFF4122 are separated by 67 nucleotides
GFF4122 and GFF4123 are separated by 2 nucleotides
GFF4123 and GFF4124 are separated by 98 nucleotides
GFF4120 - Methionine gamma-lyase (EC 4.4.1.11), at 4,143,219 to 4,144,559
GFF4120
GFF4121 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 4,144,559 to 4,145,491
GFF4121
GFF4122 - hypothetical protein, at 4,145,559 to 4,147,412
GFF4122
GFF4123 - Phosphoserine phosphatase (EC 3.1.3.3), at 4,147,415 to 4,148,089
GFF4123
GFF4124 - ABC transporter, permease protein (cluster 9, phospholipid), at 4,148,188 to 4,149,300
GFF4124
Group
Condition
GFF4120
GFF4121
GFF4122
GFF4123
GFF4124
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.1
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.0
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.1
+0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.0
-0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.0
N.D.
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.3
-0.0
N.D.
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.1
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.0
N.D.
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.1
N.D.
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
+0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.2
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.1
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.4
-0.3
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
-0.1
N.D.
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.1
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.4
+0.1
N.D.
-0.1
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