Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21090	PS417_21095	PS417_21100	PS417_21105	PS417_21110
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.9	-2.2	-2.7	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	-2.7	-3.3	-0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0	-2.7	-2.7	-0.1	+0.3
solid stress	Fraxetin 3 mM; solid stress	-1.5	-0.3	-0.9	-1.2	+0.0
stress	R2A with Fusaric 120 ug/mL	-0.1	-1.8	-1.8	+0.1	-0.2
carbon source	Gly-Glu (C)	-1.5	-0.7	-1.1	+0.1	-0.3
stress	R2A with Fusaric 120 ug/mL	-0.8	-1.5	-1.4	+0.0	+0.0
carbon source	octanoate (C)	-1.6	-1.0	-1.1	-0.0	+0.3
solid stress	Fraxetin 3 mM; solid stress	-0.9	-0.5	-0.3	-1.3	-0.1
stress	R2A with Fusaric 120 ug/mL	+0.2	-1.8	-1.5	+0.1	+0.1
solid stress	Fraxetin 2 mM; solid stress	-0.9	-0.3	-0.4	-1.1	-0.2
solid stress	Fraxetin 3 mM; solid stress	-0.8	-0.6	-0.4	-0.9	-0.3
stress	Tetracycline 0.001 mg/ml	-1.0	-0.8	-0.9	-0.1	+0.0
stress	R2A with Fusaric 120 ug/mL	+0.3	-1.5	-1.8	+0.1	+0.1
solid stress	Fraxetin 3 mM; solid stress	-0.6	-0.6	-0.5	-0.9	-0.2
carbon source	octanoate (C)	-1.0	-0.8	-0.9	+0.0	-0.1
stress	R2A with Fusaric 120 ug/mL	+0.3	-1.4	-1.5	-0.0	-0.0
stress	Doxycycline hyclate 0.001 mg/ml	-0.9	-1.2	-0.7	-0.0	+0.2
carbon source	Gly-Glu (C)	-0.5	-1.1	-0.8	+0.1	-0.1
stress	R2A with Fusaric 120 ug/mL	+0.2	-1.3	-1.5	+0.1	+0.1
seeds	Growth on radish seeds for 72 hours	+1.7	-0.2	-0.8	-0.2	+0.1
liquid stress	80% Methanol 3 mM; liquid stress	+0.8	+0.6	+0.6	-1.0	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+1.0	+0.5	+0.2	-0.6
stress	1-ethyl-3-methylimidazolium acetate 35 mM	+1.0	+0.5	+0.9	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.9	+1.1	+0.2	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5	+0.5	+0.8	+0.4	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.2	+0.5	+0.6	+0.2	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	+1.0	+1.2	+0.2	-0.1
stress	Neomycin 0.04 mg/ml	+1.4	+1.4	+1.2	+0.1	+0.1
stress	Gentamicin 0.008 mg/ml	+3.5	+3.6	+3.6	-0.2	+0.2